Lycium barbarum (goji berry): 132614438
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Entry
132614438 CDS
T09483
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00730
Thiamine metabolism
lbb00900
Terpenoid backbone biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
132614438
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132614438
Enzymes [BR:
lbb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
132614438
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
132614438
NCBI-ProteinID:
XP_060184874
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All DBs
Position
10:4578123..4589579
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AA seq
712 aa
AA seq
DB search
MAVSSGPVFRINQPTLPYLTSPRFHLTKKKFLVKASVNGSDEINGKIVRNKEKDSWQIDF
SGDKPPTPFLDTINYPMHMKNLSKLDLEHLAAELRAEIVYSVAKTGGHLSSSLGVVDLTV
ALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSKMHTIRKTSGLAPFPKRDESVYDAFGAG
HSSTSISAGLGMAVARDLLGKNNHVISIIGDGSMTAGQAYEALNNAGFLDSNLIVILNDN
EQVSLPTATLDGPATPVGALSGALSKLQASRKFRQLREAAKSITKQIGPQAHEVAAKVDE
YARGMISASGSTLFEELGLYYIGPVDGHNIEDLISILQKVKSMPAPGPVLIHIVTEKGKG
YPPAEAAADKMHGVAQFDPKTGQQFKAKSPTLSYTQYFAESLIKEAENDDKIVAIHAAMG
GGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDV
DLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELMHMVATAAAI
HDRPSCFRFPRGNGIGAVLPQNNKGIPIEVGKGRILREGERVAILGYGSIVQQCLGAADI
LQSHNVRITVADARFCKPLDADLIRRLAKEHEILITVEEGSIGGFGSHVAHFLSLNSILD
GPLKLRSMVLPDRYIDHGSPLDQIEAAGLSSRHISATILTLLGRPKEAMVVN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcttcaggtcctgtattcagaattaaccagcctactttaccgtatttaaca
agtccaagatttcacctcactaagaaaaagtttcttgtaaaagcttctgtgaatggttca
gatgaaattaatgggaagatagtaagaaacaaagaaaaagatagttggcagattgacttt
tcaggagataagccacctacaccatttttggatacaatcaattatccaatgcatatgaag
aatctatccaaactggatcttgaacatttagctgcagaattaagagcagagattgtttat
tcagtggcaaaaacaggaggccatttgagttcaagtttaggtgttgtggatttaactgtg
gctttgcaccatgtttttgatactcctgaggataaaattatatgggatgttggtcatcag
gcatatgcacacaaaatcttgacaggaaggaggtccaaaatgcatacaattagaaagact
tcagggctagcaccatttccaaaaagagatgaaagtgtatatgatgcttttggtgcaggg
catagttcaacaagcatctctgctggtcttggcatggcggttgctcgagatcttttaggg
aaaaacaaccatgtcatttctataatcggagatggatccatgacagcaggacaagcatat
gaggccctgaataatgcagggttcctcgattcgaatctaatcgtcatcctgaatgataat
gaacaagtttctctaccaactgcaactttagatggccctgcaactccagtaggagccctc
agcggtgccttaagcaaactccaagctagtcgtaagtttagacaacttcgcgaagctgca
aagagtataacaaagcaaattggtcctcaagcacatgaagttgcagctaaagtagatgaa
tatgcaaggggaatgattagtgcttctggttccactctttttgaggaactcggattgtat
tatatcggtccagtagacggacacaatatcgaagacttgatcagtattttacagaaggtg
aaatcaatgccagcaccaggaccagtcctaattcacattgtaacagagaaaggaaaagga
tatccaccagcagaagcagcagccgataaaatgcacggggtggcacagtttgatccgaaa
acaggacagcaatttaaggccaaatcgcctactctttcatatactcaatactttgctgaa
tcactgattaaagaagccgaaaatgatgacaagattgtagctatccatgctgcaatgggt
ggtggaactggccttaattatttccaaaaacgattcccggagcgttgttttgatgttggc
attgctgagcaacatgcagttaccttcgcagccggtttagctacagaaggactaaaacca
ttctgtgctatctactcctcgttcttacaacgaggctatgatcaggtggtgcacgacgtg
gatcttcagaaattacctgtccggtttgcaatggaccgagccggtttggttggtgcggac
ggtccaacacattgtggagcgttcgatgtagcgtacatggcttgtttgcctaatatggta
gtaatggctccatcagatgaagcagagctaatgcatatggttgcaacagcagctgctatt
catgataggcctagttgcttcagatttcctagaggaaatggaattggtgcagttcttcct
caaaacaataaaggaataccaattgaggttggtaagggaagaatactcagagaaggtgaa
agggttgccattttaggatatggttccatagtacaacaatgtttgggtgctgcagacatc
ttgcaatcccataatgtaagaataacagtagctgatgctaggttctgcaagccattggat
gctgatcttattaggagattagccaaagaacatgaaatcttgatcactgtagaagaagga
tcaattggaggatttggctcacatgtggctcatttcttaagcctaaacagcattttggat
ggaccccttaagttgaggtcaatggtacttccagatagatacattgatcatggttcacca
cttgatcaaattgaagcagctggtttatcatctaggcatatatctgctacaattctaaca
ttattgggaaggccaaaggaagctatggtagtaaattaa
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