Lycium barbarum (goji berry): 132614770
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Entry
132614770 CDS
T09483
Name
(RefSeq) exosome complex component csl4
KO
K07573
exosome complex component CSL4
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132614770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132614770
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132614770
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
132614770
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP40_S1
S1_RRP4
CHASE5
Motif
Other DBs
NCBI-GeneID:
132614770
NCBI-ProteinID:
XP_060185279
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All DBs
Position
10:38336461..38345348
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AA seq
195 aa
AA seq
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MRMEAELVTPGQVLGKASQLKAGKGAYLSTENDTVYASLTGFRSLIPPPSDSPDQRSTVE
VTGHKAHAAVPQPGSIVFARVTKVMARTASADIVCVDSKSVREKFTGIIRQQDVRATEID
KVDMHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESAAGGTMVPISWTEMQCP
LTGQVEQRKVAKVGA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggaagcagagttggtgacgccaggacaagtattgggtaaagcttcacagttg
aaagccggtaaaggtgcttacctttccactgaaaacgacaccgtttacgcctctcttacc
ggtttccgttctcttatacctcccccttccgactcgcctgaccagagatcgacagtcgaa
gttactggtcataaagcccatgcagctgttcctcagcctggttccattgtttttgctaga
gttactaaggtgatggctagaacggcttctgcagacatagtttgtgttgattccaagtct
gtgcgtgagaaattcaccggcattattaggcaacaagatgttagagcaactgagattgac
aaagtagacatgcacttgtccttccgcccgggtgatattgttcgtgcattggtgctatca
cttggcgatgcacgagcatattatctgtcaactgcaaaaaatgagctgggtgttgtatct
gctgaaagtgcggctggtggtaccatggttccaattagttggacagaaatgcagtgccct
ctaacaggtcaagtagaacagagaaaggtggctaaagttggagcttga
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