Lycium barbarum (goji berry): 132614793
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Entry
132614793 CDS
T09483
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00130
Ubiquinone and other terpenoid-quinone biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
lbb01240
Biosynthesis of cofactors
Module
lbb_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
132614793
Enzymes [BR:
lbb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
132614793
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
132614793
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
132614793
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
132614793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_1
MR_MLE_C
Abhydrolase_6
TPP_enzyme_M_2
TPP_enzyme_N
Hydrolase_4
TPP_enzyme_C
Ndr
Abhydrolase_2
MenC_N
BAAT_C
Abhydrolase_3
DUF900
Thioesterase
TPP_enzyme_M
DLH
Esterase
Abhydrolase_11
Motif
Other DBs
NCBI-GeneID:
132614793
NCBI-ProteinID:
XP_060185317
LinkDB
All DBs
Position
10:complement(101285381..101320341)
Genome browser
AA seq
1701 aa
AA seq
DB search
MNYQSLITGSHTFPFSPSLPIRCTIINVTNYNHFPLHTRRFTLHHRLSKTPNFQVVRCSM
RENRILEPDDAALLISTCITRTLSPALTLEQGLEKIKEAVKELKAKPPCCSSGMFRFQVA
VPPSAKSLNWFCCQPESSGVFPQFFLSKERENPSGKSVVLGHTRGTFGIGAAINLKGFSA
TKRYGESGRCAVESTPVVAYGFLDLSFDAISSSMKQEAGSFYFFVPQIEIVEFEGASILS
TTVAWNDSCICTFEEALQECELSLLQAEGSFSSVEDGCCSNRIGVSLKKVHIKEGQAQMV
YANLHKLFGKHVGPGAVELKDASCYSSQFVARLSPSVAISNNMHQHNDNTQFTCHLKDWA
NINNLWASLIIEECTRLGLTYFCVAPGSRSSPLALAASTHPTTSCIACIDERSLAFHAVG
YAKGSHKPAVIITSSGTAVSNLHPAVVEASQEFVPLLLLTADRPPELQDVGANQAINQFN
HFGPFVRHFLCLPAPTDDISARMVLTSIDSAVHIATSSPSGPVHINCPFREPLENSPRTW
NPICLRGLDSWMSTSVPFTSYIRVQHSYRYNYSTFMDEALEVIKKANRGLLLLGAIHQED
DIWAALLLAKHLSWPVVVDILSGLRLRKYFVPFPEFEDRILFIDHLDHMLLSDSIKDWMK
ADVIIQIGSRITSKRVAELLENCFPCSYIMVDNHPSRHDPSHIVTHRIHCAVPQFADYLI
TACTPHASSKWECFLQALNRVAARDISFLINSEYSLTEPCVAQMTLEAIHCESAVFLGNS
MPIRDADMYACNSNWVERTHDAAIFSSELQFHWVRVAANRGASGIDGLLSTAVGFAVGCN
KRVLCVVGDVSFLHDTNGLSLLRKQMSRKPMTIVVINNRGGAIFSLLPLANMTARSILDQ
YFYTSHNVSIRNLCMAHGVKHLKVQRKMELQDALLASQMDKEDFVIEVDSTIDANAAFHS
MLTKVSQQGVDHAFNSLSKLTVLNSMNDGLIPSKVRKMQYSKYRIQLSSPPTSSSASHIS
TYHREGFIISLYLEDGNTGYGEVAPLEIHKENLLDVEEQLQFLIHVVEGVTIDHCLPLLK
GSFSRWLWHSLGIQPNSIFPSVRFGLEMAVLNAIAAREGSSLLNVLRGQTEESTGSPLDV
KVCALLESNGGPNEMALVATTLVKEGFTAIKLKVARQADPTVDIEIIKEVRKKVGWEIEL
RADANRNWNYDEAVKFGLSVKDSGLQYIEEPVNDEDDIIKFCEETGLPVALDETINSIRK
NHLKVLAKYTHPMIVAFVIKPSIIGGFENAALLARWAHQQGKMAVISATFESSLGLSALI
LFSRYVDLLKVDTGRLLNKEESSRIAHGLGTYQWLREDVSRKPLTIGFNPCNGVVEASVT
DAGQILQHFQFNQDSIVCDCTSGEVHTYEYVADLEGISICLNVQEIGKNDDSSVVVFLHG
FLGTGGDWISIMKAISGSARCIAVDLPGHGRSKFLGQDSGSEEPELSIMALANILQQLLD
GLQCQKVFLVGYSMGARISLYMALRYNDKVAGAVIISGSPGLIDEDARKVRRAKDDFAAC
SLASSGLEPFLDAWYSVDLWNSLRIHPHFNNILASRLQHCDLKNLGRVLSDLSVGRQPPL
WEDLKSCRVPLQLIVGEKDVKFKNIAQKMHDTMCQSTETMNVPEIVEIPYSGHAAHIENP
LLVISAISQFIKEVEFKNHSY
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcagagcttaataacaggaagtcatacatttcctttttctccatctctccca
attcgctgtacaatcatcaatgtaaccaattacaaccattttcccttacacactcggcgc
ttcacattgcatcatcgtctctctaaaacccccaactttcaggtagttcgctgttcaatg
cgagaaaacagaatattggaaccagatgatgcagcattgttgatttcgacgtgcattact
cgcactttatctccagcattgactttagaacaaggattggaaaagattaaggaagctgtc
aaggagctgaaggccaagcctccttgttgttctagtgggatgtttcggttccaggttgct
gttcctcccagtgcaaaatctttgaattggttttgctgtcaacccgagtcatcaggggta
tttccgcaatttttcctttccaaggagagagaaaacccatcaggtaagtcagttgtattg
ggtcatactcgcgggaccttcggaattggcgcagcaatcaacttgaagggcttttctgcc
actaaaagatatggtgaatctggaagatgtgctgttgaatcaacaccagtggtggcttac
ggatttttggacttaagttttgatgcaatatcgtcttccatgaagcaagaagctgggtca
ttctacttcttcgttccacagattgaaatagtggagttcgaaggtgcttctatcttatct
acaacggtggcatggaacgactcttgtatatgtaccttcgaggaggctcttcaagaatgt
gagttgtcacttttgcaggctgaaggtagctttagttctgtagaagatggatgctgcagc
aatcgcattggtgtgtctcttaaaaaggtccatataaaggagggacaagctcaaatggta
tatgcgaatcttcacaaactgtttggaaaacacgttgggcctggtgctgtggaactgaaa
gatgcctcatgctattctagccagttcgtcgcaagactatcaccttctgttgcaatttcg
aataatatgcatcaacacaatgataacacacaatttacttgccacttgaaagattgggca
aacatcaataacctgtgggcatcgctaataattgaggaatgcactcgacttggtctgacg
tatttttgtgtagctccaggatcacggtcatctcctcttgctcttgctgcttctactcat
cctactacaagttgtattgcatgcatcgatgagcgctcacttgcatttcatgccgttggt
tatgctaaaggttctcataaacctgctgttatcatcacatcatcaggcacagcagtttca
aatcttcaccctgctgtcgtggaagccagtcaagaatttgttccgctgctgttacttaca
gcagaccgtcctccagagctgcaagatgttggagcaaaccaagccatcaatcagttcaat
catttcggtccatttgtgaggcacttcctctgtcttcctgcgcccactgatgatatttct
gcaagaatggtgcttacctccattgactctgctgttcatattgcaacttcttcaccaagt
ggtccagttcatatcaactgcccttttcgagaaccactggaaaatagtccaagaacgtgg
aaccctatttgtttaagagggttagactcttggatgtcaactagtgtaccttttaccagc
tatatccgagttcaacattcttatagatacaattacagtacctttatggatgaagctctg
gaagtgataaaaaaggcaaatagaggccttttattgcttggcgctatacaccaggaggat
gacatatgggctgctcttcttcttgctaaacacctttcatggcccgttgtcgtggacatt
ctgtcaggtctccgattgaggaaatattttgttccatttcctgaatttgaagatagaatt
ctttttatcgatcatctagatcatatgctgctttcagactccatcaaggattggatgaag
gcagatgtgataatccagattggaagtcgcataacaagcaagcgtgtggctgaactgcta
gagaactgctttccatgttcatacataatggttgacaatcacccaagtcgtcatgatcct
tcacatattgtgacgcataggatccattgtgcggttcctcaatttgcagattatttaatt
acagcttgtactccacatgctagcagcaaatgggaatgttttttacaagcattgaacaga
gtggctgcacgggatatctcatttctaatcaattctgagtactccttgactgagccttgt
gttgcacaaatgactctggaagctattcactgcgagtctgctgtatttttgggtaacagc
atgccaatacgtgatgcagacatgtatgcatgtaactctaactgggtagagcgtacccat
gatgcagccatattcagctcagaattacaattccactgggttcgggttgccgctaataga
ggggctagtggtattgatggtctgcttagcacagctgttggttttgcagttggatgcaac
aaaagagtactttgtgtagttggagatgtttcttttctgcatgacacaaatgggctgtcc
ctcttgagaaagcagatgtcccggaagcccatgactatagttgttattaacaaccgcggt
ggcgccatattcagtcttcttcctcttgcgaatatgactgcaagaagcattttagaccag
tatttctacacatctcataatgtttcaattcgcaacctatgcatggcacacggtgtaaag
catttgaaagtacaacgcaaaatggaactacaagatgctctgttagcatctcaaatggac
aaggaagattttgtcatagaggttgatagcaccattgatgccaatgctgcctttcatagt
atgttgacaaaagtttcacagcaaggagtggatcatgctttcaacagcctttcaaaactt
actgttttgaattccatgaatgatgggttaatacccagcaaagttcgtaaaatgcagtac
tcaaaatatagaattcagctgtcctctcctcctacttcatcttctgccagtcacatatcc
acctaccaccgagaaggcttcattataagtttgtatcttgaagatggtaacactggttat
ggagaggttgcgcctcttgagatccacaaagaaaacctacttgatgttgaagagcagctt
cagttccttattcatgttgtagaaggtgttactattgaccactgccttcctttgctgaag
ggttcattttctcgttggttgtggcacagcctaggtattcagcccaattcaatcttccca
agtgtgagatttggcctggagatggctgtcctcaatgctattgcagctagagaaggttca
agcctgttgaatgtactacgtggacaaacagaagaatcaactgggagtcctttagatgtc
aaagtttgtgcactacttgagtctaatggtggtcccaatgaaatggctcttgttgcaaca
acacttgtcaaagaaggatttactgctataaagctaaaggtagcacgtcaagcagatccc
actgtggacattgaaattataaaggaggtaagaaagaaagttggttgggagattgagctg
cgtgctgatgcaaatcgaaattggaactatgacgaagctgttaaatttggcctttctgta
aaagatagtggcctgcagtatattgaggagcctgttaatgatgaagatgatataatcaag
ttctgcgaggagactggcttgccagtagctctggatgaaactatcaacagtataagaaag
aatcaccttaaagtgcttgcaaagtacactcacccaatgatagttgcttttgttatcaaa
ccaagcatcattgggggtttcgaaaatgcagcgttgcttgcgcgatgggctcaccagcag
ggaaagatggctgttatcagtgccacatttgaaagttctttggggttgtcagctctgatt
cttttctcacggtatgttgacctgctgaaggtcgatacaggtagattgcttaacaaggaa
gagagctctcgcatagcccatggtcttggaacttatcaatggcttagggaagatgttagc
agaaagcctttaacgattggctttaatccttgcaatggtgttgtggaggcatctgttact
gatgctggacagatcctgcagcattttcagttcaaccaagattcaattgtttgtgattgt
acttccggagaagttcatacatatgaatatgtagctgatcttgagggcatctctatctgt
cttaatgtgcaagaaattggaaagaacgatgatagtagtgtagtcgtgtttcttcatggc
ttccttggaactggaggagattggatctctattatgaaggctatctcaggctcagctaga
tgcattgcagtggacctacctggacatggaagatcaaagtttctcggccaggattctggt
tcagaggaaccagagttgtcaattatggcccttgcaaatatattgcagcagttgcttgac
ggtctacagtgtcaaaaagtttttcttgttggatattctatgggagcaaggatttcactc
tacatggccctaagatacaacgataaggttgctggagctgtcataatatctggaagtcct
ggcttgatagatgaagatgcgagaaaagtccgtagggccaaggatgattttgcagcctgc
tctcttgcttcttctggcttagagccttttttagatgcttggtattccgtagatctctgg
aatagtttaagaattcatccacatttcaataatattcttgcgagccgattgcagcattgt
gatctgaaaaatctcgggagagtattatcagatctgagtgttgggagacagccgccatta
tgggaagatctgaagagctgcagggtacctcttcagttgattgttggagagaaagatgtt
aaatttaagaacattgctcaaaagatgcacgacacaatgtgccagagcacggagactatg
aacgttccagaaatagttgaaattccatattctggtcatgctgcacatattgagaatcct
ctccttgtgatcagtgcaataagccagtttatcaaagaagttgagttcaaaaatcatagt
tattaa
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