Lycium barbarum (goji berry): 132615031
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Entry
132615031 CDS
T09483
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase-like isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00240
Pyrimidine metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
132615031
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
132615031
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GFIT
Motif
Pfam:
Indigoidine_A
Uma2
Motif
Other DBs
NCBI-GeneID:
132615031
NCBI-ProteinID:
XP_060185566
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Position
10:118105058..118114784
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AA seq
319 aa
AA seq
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MASSRNSRLAIISRHFTSATSPSKHGLNGQNLGWIKISPEVSIALKHGSPIVALESTIIS
HGMPYPQNFETAKELEVIVREHGAVPATIAILDGIPCMGVYLILRFIGFFSLFLVGGLTT
EELENLAHLGSKARKTASRDIALVMAGRENGATTVSATMHLASMVGIPIFVTGGIGGVHR
HGDNITAMDISSDLTELGNTPVAVISAGVKSILDIPRTLEYLETQRVTVAAYKTDEFPAF
FTQTSGYKAPARAESPEHCARVIDANIRLERKSGILIAVPIPKEHSASGSLIGSAIQQAL
QEAREKKIIGNAETPFLLA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcacgtaattctagattagcaatcattagtagacacttcacttcagcaact
tctccctctaagcatggccttaatggtcaaaatttggggtggattaagatatctccggag
gtttccatagcattaaaacatggaagcccgattgttgcattggaatcgactataatatct
catggaatgccatatcctcagaatttcgagacagcaaaagagttggaggtcattgtgagg
gagcatggagctgtacctgccactatagctattctggatggcataccatgcatgggtgtc
tatctgatacttcgttttattgggttcttttctcttttcttggttggaggcttgactact
gaagaactagagaatctagcacatcttggtagtaaagctcggaaaactgctagtagagac
attgcacttgttatggcaggcagagagaatggagcaactactgtctctgcaacaatgcat
ctcgcttcaatggttggtattccaatatttgtgaccggtggtattggaggagttcataga
catggagataacattacagcaatggatatttcttctgatcttactgagcttggaaatact
cctgtggctgtgatctctgctggtgtaaaatcgatattagatattcctcgaacacttgaa
tatttggaaactcaaagagttactgttgcagcttataaaaccgatgagttccctgctttt
ttcacacaaactagtggctacaaggcacctgctcgagcagaatcgccagaacattgtgct
agagttattgatgcaaacataagacttgagcgaaagagtggaatcttgatagcagtcccc
attccaaaggagcattccgcttctggaagtttgattgggtcggcaatacagcaagctctc
caagaagcacgagagaagaagattattggcaatgctgaaactccattcttgcttgcatga
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