Lycium barbarum (goji berry): 132615358
Help
Entry
132615358 CDS
T09483
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
132615358
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
132615358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
132615358
NCBI-ProteinID:
XP_060185934
LinkDB
All DBs
Position
10:123799650..123810325
Genome browser
AA seq
683 aa
AA seq
DB search
MKTVWWKRQWSHFLGLLGIFLQLFLIIECAATRRIAKYNSQLDLQSYPPVQLLKLKNHVM
VDNGLFNTTFSVPGGMVTAINYNGINMLENENKENNRGYWDIVWNKAEKPGIIYDKLEGT
KFEVILSDENQVELSFIRIWKSLNASSLSMNVDKRFIILRGHSGFYSYAILERLDGWLDI
DVYQGRIAFKLNEKLFPYMAISDKRQRIMPTEKDRDMGRELDYKEAVLLTGTTNYFLKGE
VDDKYQYTLENKDNRVHGWISPSSRTGFWMITPSNEFRTGGPIKQDLTSHTGPVTLSMFF
STHYGGEILALRFRNGESWKKVFGPVFIYLNSASSDDEDILTLWTDAKEQMLIETENWPY
DFPLSEDFVQANQRGIVSGRLLVSDSYMNKTLITANSAFIGLAAPGDVGSWQLENKGYQF
WTQTDAEGYFLIKNIIPGNYSLYAWVPGFLGDYKYDDYINITPGSRTRLHTLVYDPPRNG
PTLWEIGIPDRTAAEFFIPNPQPRLHNQLYIEHYHAEKFRQYGLWDRYTEIYPNDELVYT
VGSSNYQTDWFFAHVNRYIYNDEVNKTYIPTTWQIIFDLQEVVYSSNYTLQLALASATEA
DLQIRINDETAKVPHFTTGSIGRDNAIARHGIHGLYRMYSIDVPSNLLAIGNNVIFLKQS
RGSTPWNGVMYDYIRLEGPSGNG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagtttggtggaagagacaatggagtcattttcttggattgttgggaattttt
cttcagctgttcttgataattgaatgtgctgcaacaaggagaattgctaagtacaacagc
caattggacttgcaatcctatcctcccgtacaattacttaaactgaaaaatcatgttatg
gtggataatggtctatttaacaccacattttctgttcctggaggaatggtcactgcaata
aactacaacggaattaatatgttggaaaatgaaaataaagaaaataatagagggtattgg
gatattgtttggaacaaagcagaaaaaccggggatcatctatgacaaacttgaagggaca
aagtttgaagttatactgagtgatgaaaatcaagtagagctttcattcataaggatttgg
aagtctttaaatgcctcaagtctttctatgaatgttgacaaaaggtttataattctgagg
gggcatagtggattttactcctatgcaattttggagcgcttggacggatggctagacata
gatgtttaccaagggagaatagccttcaagcttaatgaaaaattgttcccttatatggct
atttcagataaaaggcagaggataatgcccacagaaaaagatagagacatgggccgagag
cttgattacaaagaagctgtacttcttacaggcacaactaattacttccttaaaggagag
gtggatgataaatatcaatatactcttgaaaacaaggataacagggtccatgggtggata
agcccaagctcaagaactggattctggatgatcacaccaagtaatgagttccgaacaggt
gggcctattaaacaagacctcacttctcacaccggcccagtaacactatccatgttcttc
agtacacattatggtggggagattctagcattgagatttcgaaatggagagtcatggaag
aaggtttttggacctgtttttatttacctaaattcagcttcatccgatgatgaagatatt
ctcacactatggacagatgcaaaagaacagatgctgatcgaaacagagaattggccatat
gatttccctctttcggaagatttcgttcaagctaatcaacggggtattgtaagtggcaga
ttgctcgttagcgacagctatatgaataaaacacttatcactgcaaattctgcttttatt
ggattggccgcacctggagatgttggatcatggcaactagaaaataagggttatcaattt
tggactcaaacagatgcagagggatatttcttgattaaaaatatcatcccaggaaattat
agcttgtatgcttgggtccctggatttcttggtgattacaaatatgacgactacattaac
atcaccccaggatcaagaactaggctgcatactcttgtgtatgacccaccaagaaatgga
ccaacattgtgggaaataggcattcctgacagaactgctgcagaattcttcattcctaat
ccacaaccaagacttcacaatcagttgtacattgaacattatcatgctgaaaagtttagg
caatatggattatgggatcgttacacagaaatataccctaatgatgagctagtctacact
gttggatcaagtaactatcaaacagattggttctttgctcatgttaatagatatatttac
aatgatgaggtgaacaaaacatatataccaactacatggcaaattatttttgatcttcaa
gaagtggtgtattcctcaaattatactcttcaactagcattagcctcagcaacagaagct
gacttacagattcgaataaatgatgagactgcaaaggttcctcattttacaacagggtcg
ataggcagggataacgccattgcaagacatggaattcatggattgtatcggatgtatagt
atagatgtacctagcaatcttcttgctattggaaataatgttatatttcttaagcaaagt
agaggttcgaccccttggaatggagtcatgtatgattatattcgtctagaaggaccctct
ggaaatggttaa
DBGET
integrated database retrieval system
