Lycium barbarum (goji berry): 132615613
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Entry
132615613 CDS
T09483
Name
(RefSeq) ABC transporter A family member 1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132615613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbb02000
]
132615613
Transporters [BR:
lbb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132615613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
R1_ABCA1
SMC_N
ABC2_membrane
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
132615613
NCBI-ProteinID:
XP_060186204
LinkDB
All DBs
Position
10:complement(121697990..121720131)
Genome browser
AA seq
1902 aa
AA seq
DB search
MMEKNKEKEDMRNSRRQLKAMLRKNWLLKIRHPFVTCAEILLPTLVMLLLIAVRSKSDIR
IHPAQPYIRKGIGMLVEVGKGDTSPPFNQVLELLLAKEEYLAFAPNTAETRTMINILSLK
FPLLRLVTRVYKDEGELESYLRSDLYAAYDQNKNITNPKIKGAVVFHEQGPQLFDYSIRL
NHTWAFSGFPDVNSIMDTNGPFLNDLALGVNTIPILQYGLSGFLTLQQVMDSFIIYAAQE
TMTNSLRLPSEYLDSDSQLKIPWTQFSPSEIRLAPFPTREYTDNEFQSIVKKVMGVLYLL
GFLYPISRLISYSVLEKELKIKEGLYMMGLKDEIFHLSWFITYAIQFALSSVLLTVCTMG
TLFEYSDKTLVFVYFFSFGLSGIMLSFMISTFFTRAKTAVAVGTLTFIGAFFPYYTVNDE
TVSMIVKVIASFLSPTAFALGSINFADYERAHVGLRWSNMWRESSGVCFLVSLLMMLLDS
MLYFAVGLYLDKVLHKENGFCYPLRSLLQKCFGRKKNNRDIYASTSEVKFADNYDETSGT
DFIKDVSGPTLEAKSLDMKQQESDGRCIQIRNLRKVYATNRGSCCAVNSLQLTLYENQIL
ALLGHNGAGKSSTISMLVGLISPTSGDALVLGKNILTDMDEIRKSLGVCPQYDILFPELT
VKEHLEIFADLKGVSEDSKEKAVAEMVDEVGLADKLNTVVKALSGGMKRKLSLGIALIGN
SKVIILDEPTSGMDPYSMRLTWQLIKRKKKGRIILLTTHSMDEADVLGDRIAIMANGSLK
CCGSSIFLKHQYGVGYTLTLVKTAPGASVAADIVYRHVPSATCVSEVAAEVSFKLPLASS
SSFESMFREIERCMRRSNPKFETTDYREVGNFSIESYGISVTTLEEVFLRVAGGDFDQAE
LVEEKTDPIICDSADLKVCQTNASKIFFPSKLCGNYCGVIWLMVTLIGSACNLIWAAVSS
VIRVVTMQCCCCCILSRSTFWKHSKALLIKRAKSAQRDRKTIVFQLLIPAFFLLLGLLFL
KLKPHPDQQSVFLTTSYFNPLLSGGGGGGPIPFDLTLPIAKEVVDHVHGGWIQKYHETTY
RFPDSTKALNDAIEAAGSTLGPVLLSMSEYLMSSFNESYQSRYGAIVMDNQTGDGSLGYT
VLYNSSCQHSAPTFINLMNSAILRLATNHENMTIRTRNHPLPQTASQHQQHHDLDAFSAA
VVIAIAFSFIPASFAVAIVKEREVRAKHQQLISGVSLLSYWVSTYIWDFISFLFPTSFAL
ILFWIFGLEQFIGKDSLIPTILLFLEYGLAIASSTYCLTFFFSEHSMAQNVVLLVQFFTG
LILMVLSFIMGFINSTTHLNSLLKNFFRLSPGFCFADGLASLALLRQGMKNGSRDDVLDW
NVTGASILYLAAEAIVYFLLTLGLEFLPQQKRSLSRFHEWWKNLGKSRRTTSFGSSEPLL
RASSGDATSELDEDVDVKAERDRVLSGSTDNAVIYLRNLRKVYPGGKSQVPKAAVHSLTF
SVQEGECFAFLGTNGAGKTTTLSMLSGEEYPSDGTAFIFGKDIRSDPKVARRHIGYCPQF
DALLEFLTVQEHLELYARIKGVSEYDLEDVVMQKLLEFDLMKHANKPSFALSGGNKRKLS
VAIAMIGDPPIVILDEPSTGMDPIAKRFMWEVISRLSTRQGKTAVILTTHSMNEAQALCT
RIGIMVGGRLRCLGSSQHLKTRFGNHLELEVKPVEVSSMDLENLCLIIQERLFDIRPHSR
SILNDIEVCIGGTNSIVSEDVSAAEISLSKEMIMAVGRWFGNEERVKALVSATDDSCKIF
GDQLSEQLARDGGLPLPIFCEWWLAKEKFTKIHSFIQSSFPDATFQGCNGLSVKYQLPCG
EGLSLADVFGYIERNRNQLGISEYNVSQSTLESIFNHLAASS
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaaaataaggaaaaagaagatatgaggaattcaagaagacaactcaaagct
atgcttagaaagaattggttactcaaaattagacacccttttgttacttgtgctgagatt
ttactccccactctagtaatgctgttgttgattgctgtgaggagtaaatctgatatccgc
atccacccagctcagccgtatattcggaaagggatagggatgcttgtggaagttggaaaa
ggtgatacttctccccctttcaaccaagttctggagctactattggccaaggaggagtat
ttggcatttgcacctaatacagctgagacaaggacgatgatcaacattttgtctctaaaa
tttcccctactgaggctagttaccagagtttacaaagatgaaggagaacttgaatcatat
ctacgttcggatctttatgctgcatatgaccaaaataagaacattacaaaccccaaaatc
aaaggagcagtagtatttcacgagcaaggtcctcagttatttgattatagcatacgccta
aaccatacatgggctttctcaggatttcctgatgttaattccataatggacacaaatggt
ccgtttctgaatgacttggcattaggcgtcaacaccataccaattttgcaatatggtctc
agtgggtttttaacactccaacaagtcatggactcattcataatatatgctgctcaagaa
actatgacaaactcactaaggttgcccagcgaatatcttgattcagattcccagctcaag
ataccatggactcagtttagtccttcagaaataagacttgctccttttccaactcgtgaa
tatacagataatgaattccagtccattgtcaagaaagtcatgggagtgctgtacttgctg
gggtttctttatccgatttctcgtctaattagttactctgtcttagaaaaggagctcaag
ataaaagagggtctctacatgatgggtttgaaagatgaaatattccatctctcttggttt
ataacatatgcaattcagtttgctctttcttctgtgctacttacagtatgcaccatgggt
accctctttgaatacagtgataagacgttggtgttcgtgtacttcttttcctttggccta
agtggaataatgctctcatttatgatttccacgttcttcacgagagcaaaaactgcggta
gctgtcgggacccttactttcatcggggcattctttccctattatactgtcaacgacgaa
acagtctccatgatagtaaaagtgattgcttcttttctttcacctacggcctttgcgtta
ggatccatcaattttgctgactatgaacgtgctcatgttggactccggtggagtaacatg
tggcgggaatcttcaggagtgtgctttttggtctctctcctgatgatgttacttgacagt
atgttatactttgcagttggtctgtatcttgataaggtcctccacaaggagaacggattt
tgctacccattgcgttccctgcttcagaagtgctttgggaggaagaaaaataatagagat
atttatgcatccacctcagaagtcaagttcgccgataattatgatgaaacaagtggtact
gattttataaaagatgtatcaggaccaactctagaagcaaagagcttggacatgaagcag
caagaatcggatggcagatgtattcaaatcagaaatctgcgaaaggtgtatgctacaaac
aggggaagctgttgtgctgttaattctttacaactgactttgtacgagaatcagattctg
gcacttttaggacacaacggggctggtaaaagcagtacaatatccatgcttgttggtctc
atttctcctacttctggagatgctctggtgttagggaagaacatcttaactgacatggat
gaaatacggaagagtctgggagtctgccctcagtatgatattcttttcccagaattaact
gtgaaggaacatttagaaatattcgctgatttaaagggtgtttcagaagactctaaagaa
aaggctgtggctgaaatggttgatgaagttggattggcagacaaacttaatactgttgtt
aaagctctttctggaggtatgaaaaggaagttgtcccttgggatagctcttatagggaac
agtaaggttattattctcgatgaaccgacaagtggaatggatccatactctatgcggtta
acttggcagctgatcaaaagaaaaaagaagggaagaatcatattacttacaacacattcc
atggatgaagctgatgtgctaggagatcggattgctatcatggccaatggttctcttaag
tgctgtggaagttcaatcttcttgaaacatcagtatggggttggttacactctcactctg
gttaagactgcgccaggtgcctcagtagctgctgatattgtttaccgtcatgtaccttct
gcaacatgcgtgagcgaagttgctgcagaggtttccttcaagcttcccctagcatcctca
tcttcctttgagagcatgtttcgggaaatagagcgctgcatgagaagatccaaccctaaa
tttgaaacaacagactatagagaggttggcaattttagcattgagagttatggcatatct
gtcacaactctagaggaagtgtttctgagggttgctggtggtgacttcgatcaagcagag
ctcgttgaagagaaaacggatccaattatatgtgattctgctgatttaaaagtgtgccaa
actaatgcttcaaagatattcttcccttccaaattatgtggaaactattgtggtgtcatt
tggctcatggtgaccttaattggttcagcttgtaatctaatctgggctgcagtttcaagt
gtcattagggttgtgacgatgcagtgctgttgctgttgtatactgtcaagatctacgttc
tggaaacactcaaaagccctacttatcaagcgagcgaaatcagctcaaagagatcggaaa
acaattgttttccagctgttaattcctgctttctttttgcttcttggtctgctgtttctt
aagcttaagccacatcccgaccagcagtcggtcttcctcacgacctcgtactttaatcct
ttattaagtggtggtggtggaggtggtcccattccttttgacctcaccttgcctatagca
aaggaggttgtcgaccatgtccatggaggctggatccaaaagtatcatgagacaacatac
agatttcctgattctactaaggcactgaacgatgccatagaagcagcaggatccacttta
ggccctgtcctactttcgatgagcgaatatctgatgtctagctttaatgaatcttatcag
tcgaggtatggagcgatagtcatggataatcagactggtgatgggagccttgggtacact
gttctatacaacagttcttgccagcattctgctccaacatttatcaatttgatgaattca
gcaatactcaggctagctacaaatcatgaaaatatgacaattcgcactcgtaaccaccct
ttgccgcagacagcaagccagcatcagcaacatcatgatctcgacgccttctctgctgca
gttgtaatcgctatagccttttcttttattcctgcctcattcgctgtagcgattgtcaag
gaacgtgaagtgagagctaagcatcaacagctaatcagtggggtgtctttactctcatat
tgggtttccacatatatatgggatttcatcagcttcttatttcctacatcttttgcatta
atcctcttttggatatttggtcttgagcaatttattggaaaggattctctcatcccaaca
attctgttgtttcttgaatatggactagccattgcttcatcaacatactgcctcacattc
ttcttttccgagcacagcatggctcagaatgttgtcctcctcgtccaatttttcaccggc
ctcattcttatggttctatccttcataatgggatttataaattctacaacacacttaaat
tctctgctcaagaacttctttagactgtcaccgggattttgctttgctgatggattagct
tcattggctcttttaagacaagggatgaagaatggatctagagatgacgttctcgactgg
aatgtgactggtgcttctatattatacttggctgctgaggccattgtgtatttcctttta
actctggggcttgaattcttgcctcaacaaaaaaggagtctttccagatttcatgagtgg
tggaaaaacttaggaaaatctaggcgtactacttcatttggatcttcagaacctcttctg
cgagcatcctcaggggatgctacttctgaactcgatgaggacgtagatgttaaagcagag
agagacagggttttatctggctcaactgataatgctgttatctacctccgtaatcttcgg
aaggtttatcctggagggaagtcccaagttccaaaagctgctgttcattcgctgactttc
tctgtccaagaaggagagtgttttgcgttcttaggaactaatggagcagggaagacgaca
acgctgtcaatgctatctggagaagaataccccagtgatggaacggcattcatttttgga
aaagatatacgttcagatcccaaggttgctcgtaggcacattggatattgtcctcagttt
gatgctttactagaatttctgactgtccaagaacatctcgagctctatgcaagaattaaa
ggagtatcagagtatgatctggaagatgttgttatgcaaaagttgctcgagtttgacctg
atgaagcatgcaaataaaccatcctttgccttaagcggagggaacaagcgcaagttatct
gttgcaattgcaatgattggagatcctccgattgtcattcttgatgagccatccacaggt
atggatcctattgccaaacggttcatgtgggaagttatatctcgtctatcaactagacaa
ggaaagacagctgtaattttaactactcacagcatgaatgaagctcaagctctatgtaca
agaattgggataatggttggaggcaggttgaggtgtcttggtagttctcagcacttgaaa
actcgcttcgggaatcatcttgaactagaggttaaaccagttgaagtcagctctatggat
ctggaaaatctctgcttaataattcaagaaaggctattcgatattcgtcctcactctaga
agtatactaaatgacattgaagtttgcattggaggtactaactctatagtctcagaagac
gtgtcggcggcagaaataagcttatcaaaggaaatgatcatggctgttggacggtggttt
ggcaatgaagaaagggtgaaagcattagtatcggcaactgacgattcttgtaagattttt
ggtgaccagttgtcagagcagttggctcgtgatggtggactcccgttgccgatattctgt
gagtggtggttggctaaggagaagttcaccaaaatccattcattcattcagtcttcattt
cctgatgcaacatttcaaggttgcaatggattaagtgttaagtatcagttgccttgtgga
gaaggtctttcacttgctgatgttttcgggtacatagagaggaacagaaaccaactcggg
atatcagagtacaatgtcagccaatctacgcttgaatcaatatttaatcatttagcagca
agctcctga
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integrated database retrieval system
