Lycium barbarum (goji berry): 132615832
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Entry
132615832 CDS
T09483
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132615832
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132615832
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132615832
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132615832
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132615832
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132615832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
SASP
RA_2
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
132615832
NCBI-ProteinID:
XP_060186403
LinkDB
All DBs
Position
10:13684003..13709897
Genome browser
AA seq
1147 aa
AA seq
DB search
MTLIDTHSVDPEEDGMLVPNSDFPVEGPQPMEVATADTASTVDGPPVDDPPSARFSWTIE
NFSRLNVKKLYSEVFHVGGYKWRILIFPKGNNVDHLSMYLDVADSPSLPYGWSRYAQFSL
AVLNQAHNKFTVRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLMDDTVIVEADVAVR
RVVDYWSHDSKKETGCVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPSGSI
PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYRSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEKYGLQDARKGVLFIDFPPVLQLQLKRFEYDFARDTMVKINDRYEFPLQLDLDRE
NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDLK
RALEEQYGGEEEVFVQFLLSFKLSAYALFSCIIAIIHSLFLQQLPHANPGFNNSPFKFTK
YSNAYMLVYIRESDKEKIVCNVDEKDIAEHLRVRLKKEQDEKEQKRKEKSEAHLYTIIKV
ARDEDLGEQIGNEIYFDLVDHDKVRSFRIQKQMAFTQFKEEVAKELGIPVQFQRYWLWAK
RQNHTYRPNRPLTPQEEIQSVGQLKDVSTKTNNAELKLYLEVEVGLDLLPCPPPEKTKDN
ILLFFKLYDPLKEEIRYVGRLFVEGSGKPLEILTKLNELAGFSPDEEIELFEEIKFEPNV
MCEPIDRKQTFRGSQLEDGDIICIQKPLRSQTSEQYRFPDVPSFLEYVHNRQVVRFRSLD
KPKEDDFSLELSKQNNYDEVVESLARHLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDR
LTEMLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFYNAAKDEVTIHTIRLPKQSTVGD
VLNHLKTKVELSHPEAELRLLEVFYHKIYKIFPPTERIENINDQYWTLRAEEIPEEEKNL
GPHDRLIHVYHFTKDATQNQAHVQNFGEPFFLVIHEGETLTEVKARIQKKLQVPNEEFSK
WKFAFLSLGRPDYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDNAPKRSYATNQNRQTFE
KPVRIYN
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgactctcattgatactcattcagttgatcctgaagaagacgggatgcttgttcctaat
tcagattttcctgttgaaggtcctcagccaatggaagttgcgactgcggatacagctagt
acggtggatggtccaccagtggatgatccgccatctgctcggttttcgtggacgatagag
aacttttcgaggttgaatgtgaagaagctatactcagaagttttccatgtgggaggatac
aaatggaggatattgatatttcctaaagggaacaacgtggaccatttgtcaatgtatttg
gatgttgcagattcaccgtcattgccttatgggtggagtagatatgctcagtttagctta
gctgtgctcaaccaagcccataacaagtttacagtgagaaaagatactcaacaccagttt
aatgcaagagagagtgactggggtttcacatccttcatgccccttagtgaattatatgat
cctagcagaggctatcttatggatgatacagtcatagttgaagctgatgttgctgttcgt
agggtcgttgattactggtcccatgactctaagaaggagactggttgtgttggccttaag
aatcagggagccacttgttatatgaactctctcctccaaacgttgtaccatattccttat
tttagaaaggctgtgtatcatatgccaacaactgagaatgacaatccatctgggagcatc
cctttggctttgcagagtttgttctataagctacagtacagtgacactagtgtagcaaca
aaagagttgacgaagtcctttggatgggacacatatgattctttcatgcagcatgatgta
caagaacttaacagggttctttgtgaaaaacttgaagataaaatgaagggaaccgttgta
gaaggcacaatacaacaactgttcgaggggcatcatatgaattatattgaatgtatcaat
gtggactatagatcaacaagaaaagaatctttttatgacttgcagcttgacgtcaaaggg
tgtcgtgatgtctatgcttcatttgacaagtatgttgaagtagaacgccttgagggtgat
aataaataccatgcagagaaatatggtttacaggatgctaggaaaggtgtccttttcatt
gacttcccccctgttcttcagcttcagttaaaacgatttgaatatgattttgcacgggat
actatggtcaagataaatgacagatatgagtttcctttacaactcgatcttgatagagaa
aatggcaaatatttatctcctgatgcagatcgaagcgttcggaatctctatactcttcac
agtgttttggttcacagtggtggagtccatgggggacactattatgcttatatcaggcca
acactctctgatcaatggtttaaatttgatgatgagcgtgtgacaaaagaagatttaaag
agggctttggaagagcagtatggtggtgaggaagaggtatttgtccaattcttgctgtcc
tttaagttatctgcatatgcattattttcttgtattatagctattattcattcactgttc
ttgcaacagttacctcatgcaaaccctgggttcaacaattcaccattcaaatttacaaaa
tattcaaacgcatatatgcttgtttatatacgtgaaagtgacaaagaaaagattgtctgc
aatgtggacgagaaggacattgcggagcatctcagggtaaggctaaagaaagagcaagat
gaaaaggagcaaaagagaaaggaaaaatcagaggctcacctttatactatcatcaaggtt
gctcgtgatgaagaccttggtgaacaaattggaaacgagatttattttgatcttgtggat
catgacaaagtccgtagtttccgtatccagaaacagatggcatttacgcaattcaaggag
gaggttgctaaggaattgggtataccggtgcaatttcagcggtactggctatgggcaaaa
cgacaaaaccacacatatcggcctaatcggccgttgacacctcaagaggaaattcagtct
gttggacaattgaaagatgtctctactaaaacaaataacgctgagctaaaactttatttg
gaggttgaagttggcctggatttgctaccttgtcctccacctgagaagaccaaagacaat
attcttctatttttcaaactctatgaccctctgaaagaggagataaggtatgttgggcgg
ctctttgtagaaggcagtggcaagccactggagatattgaccaagctaaatgagttggct
ggcttttcacctgatgaagagattgaactctttgaggaaataaaatttgaacccaatgtg
atgtgtgaacctattgaccggaagcaaacatttcgtggcagtcagcttgaagatggggac
attatttgcattcagaaacctcttcgaagtcaaactagtgaacagtatcgatttcctgac
gttccctcatttttagagtatgtgcacaatcgccaggttgttcgcttccgctcattggac
aaacccaaggaggacgattttagtcttgagttgtcaaagcagaacaattatgatgaagta
gttgaaagtttggctcgccatctcggcttggatgacccatcaaaaataaggcttacatca
cataactgctactcacagcagccaaaacctcagccaataaagtatcgaggagtggaccgt
cttacggaaatgcttgttcactataatcagacttcagacattttgtattatgaagtcctc
gatattccattaccagagctacagtgcttaaaaactctcaaagttgccttttataatgct
gcaaaagatgaagtgacaatccatactattagattgcccaaacaaagtactgtaggtgat
gtccttaatcatctgaagacaaaggttgagttgtcacatccagaggctgaactgagattg
ctggaagttttctatcacaagatatataagatttttccacctactgaaaggattgagaac
ataaatgatcagtactggactttgcgtgcagaggagatccctgaagaggagaaaaacctg
ggtcctcatgatcgcttgattcatgtttaccattttacgaaggacgcaactcaaaatcaa
gcacatgtacaaaactttggcgagccattttttctggttattcatgagggtgagacactg
actgaagtaaaagcacgcattcagaaaaaattgcaggttcccaatgaggagttttcaaag
tggaagtttgcgtttttgtccctgggccgtcctgactacctccaggattcagatattgtg
tccagtcgctttcagaggagagatgtttatggtgcttgggagcagtatcttggattagag
cattcggacaatgctcctaaaaggtcatatgctaccaaccagaatcgacaaacttttgag
aagcctgttcggatctacaattag
DBGET
integrated database retrieval system
