Lycium barbarum (goji berry): 132615978
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Entry
132615978 CDS
T09483
Name
(RefSeq) vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03250
Viral life cycle - HIV-1
lbb03272
Virion - Hepatitis viruses
lbb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132615978
03272 Virion - Hepatitis viruses
132615978
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132615978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132615978
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132615978
Membrane trafficking [BR:
lbb04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
132615978
Exosome [BR:
lbb04147
]
Exosomal proteins
Proteins found in most exosomes
132615978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Dsl1_C
Motif
Other DBs
NCBI-GeneID:
132615978
NCBI-ProteinID:
XP_060186560
LinkDB
All DBs
Position
10:106709754..106720107
Genome browser
AA seq
873 aa
AA seq
DB search
MTSPSSTTNVMLSISEKKTVTIDLYRPLRNYIVYNYSEREAQNLEDDLQTLKQYRIDIES
SSSASSLAARRDLLQNYYKALCAVESRFPISNDQDHVNSLTFTWYDAFKNRNKAAQQNIH
LEKAAVLFNLGAVHSQMGLGFDRSSVEGRKQASHSFIAAAGAFAFLRDNVAMKASMGSST
TVDVSVECVGMLERLMLAQAQECVFENSIAKGNTPGVCSKISRQVGLFYEEALAALSVAP
LNQHLDKTWLAHVQLKASLFYAEACYRYSLELHDKEEIAEEIARLKSGVNALSEARKTSP
RGSPQQLLDAINKLEATLNLNLDRAMKENDRVYLMRVPPASSLPPLAAFSLVKPMQMNDI
LDASKEKMFASLVPDNSAKALSRYTEMVDDVTRTQAEKLQQGSELARVRLREMDLPDSIL
ALEGNISLPEALKEDVEAVQICGGPAGLDAELQQLRDLKRVNQELLVQTEELLQKEATED
TQFRTQFGTRWTRPQSTTLTKNLQDRLNRFAANLKQAAESDARIERSVRDHAALMSILDR
RPIESALPTLARPILSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILP
KLMTFTGSHEDLFRKEIAKYDHISEEISQNIEAQEQLLLQIQAQNEEFASVFNLEDYKAS
RERIYRQIEAAILKYREIKENINEGLKFYVTLQEAITNVKQQCSDFVMTRNIQCREMMEE
VQRKVSGLSFQDNRNSSGYTYPSVGQAHQPPRTNPETGNIPNSSRPQTPTYQPSQQPTMS
GYSQTPPYNSPQPPAPPYHFPSQGQPYQHPQPHPQHQQQPSPSHEYGQPAYPGWRGPYYN
APPQQPGAMPQPPYTAPSPYPHPPPHQSGYYRQ
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaccatcatcaacaaccaacgtcatgctatcaatctcagagaaaaaaacggtc
acaatcgatctctaccgtccacttcgaaactacatagtctacaattactccgaacgtgaa
gctcaaaatcttgaagatgatttacaaacacttaaacaatatcgtatcgatatcgaatcg
tcatcatcagcatcatcacttgctgctagacgtgacctcttgcaaaattactataaagcc
ctttgtgctgttgagtctcgtttccctatttcaaatgatcaagatcatgttaattctctt
acttttacttggtatgatgctttcaagaatagaaacaaagctgcccagcagaacatccat
ttagaaaaagctgcagttttgttcaatctgggggcagttcacagtcagatgggattgggt
tttgatcgttcatcagttgaggggcgaaagcaggcatcacattcctttattgctgctgct
ggggcatttgccttcttgagagacaatgtggcaatgaaggcatcaatgggtagctccacc
accgttgatgtctctgtagaatgtgttgggatgctggaaagactcatgttggctcaggct
caggagtgtgtttttgagaatagcattgccaagggaaatactcctggtgtctgttcaaag
atttcaagacaggttggattgttttacgaggaagctttggcagcattaagtgttgcacct
ctgaaccagcacttggacaagacttggctagctcatgttcagcttaaggcatcacttttt
tatgctgaggcctgctacaggtacagtctagagctccatgacaaagaagaaattgcagag
gaaattgcaaggctgaagagtggtgttaatgccttgtctgaggcaagaaaaacatctcca
aggggatcaccacagcagctcttggatgcaattaataagctagaagctactttaaatcta
aacttggacagggctatgaaggaaaacgacagagtctacctcatgagggtcccaccagcc
agttctctgccaccacttgcagcattttccttggtcaagcctatgcagatgaatgatatt
ctggatgcaagcaaggagaagatgtttgccagtcttgtcccagacaatagtgcaaaagct
ctatctaggtacactgagatggttgatgatgtcaccaggactcaagctgagaagttacaa
cagggaagcgagctagctcgagtaaggctcagagaaatggacttgcctgattctattctt
gctttggagggaaatatatctctacctgaggccttaaaagaagatgtagaggcagtgcaa
atttgtggtggtccagctggtttggatgctgagctgcagcaactcagagatctgaagagg
gtgaaccaggagttgctggtccaaactgaggagcttttgcaaaaagaagcgacagaggac
acacaatttagaactcaatttggaacccgatggacaaggcctcaatctactaccctaaca
aaaaacctgcaggacaggttaaacaggtttgcagctaacctgaagcaagctgcagaaagt
gatgccaggattgagcgatcagtaagggatcatgcagcactcatgtcaatccttgaccgc
cgtccaatcgaatctgctcttccaaccttggcaagaccaatcctgtctttggacgccact
gaagatgccattgtgggagccctgaagcagagcctgaggcaactagaaactcttggtgct
cagcgagctggtctggaagatatgctgaaagagatgaagaggaaggatgatatacttccg
aaattgatgacattcacgggctcgcatgaggatcttttcaggaaggagatagcaaaatat
gatcatatttctgaagaaatttctcaaaacatcgaggcacaagaacagttgctgctgcaa
attcaggctcaaaatgaggagtttgcttctgttttcaatcttgaggattataaagcttcc
cgcgagagaatctataggcagattgaagctgccattttgaaatatcgagaaatcaaggaa
aatatcaatgagggattgaagttctatgtaacacttcaggaggcgatcactaatgtgaaa
cagcagtgtagtgattttgtgatgacaagaaacatacagtgccgagaaatgatggaagag
gtgcagaggaaagtctcaggtctcagtttccaggataacagaaattcaagtggatatact
tatccttcagttgggcaggctcatcagcctccgagaacaaatcccgagactggaaatata
cccaattcctctcgaccccagactcctacatatcagccttctcaacaaccaacaatgtct
ggatatagtcaaacccctccttataattctccacaaccgcctgcaccaccttaccatttt
ccaagtcaagggcaaccatatcagcatccacagccacatcctcaacatcaacaacagcct
tcaccgagccatgagtacggtcaacctgcatatcctgggtggcggggtccatactataat
gcacctcctcagcaaccgggagctatgcctcaacctccttacaccgcaccttctccatat
cctcatcctcctccccatcagagtggttattacaggcaatga
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