Lycium barbarum (goji berry): 132616119
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Entry
132616119 CDS
T09483
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132616119
Membrane trafficking [BR:
lbb04131
]
Protein recycling
Others
EARP complex
132616119
Endosome - Golgi transport
Tethering complex
GARP complex
132616119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
Vps54_N
COG7
RINT1_TIP1
COG5_N
XhlA
MPH2
PTHB1_hp
HemX
Motif
Other DBs
NCBI-GeneID:
132616119
NCBI-ProteinID:
XP_060186698
LinkDB
All DBs
Position
10:complement(57181991..57211795)
Genome browser
AA seq
827 aa
AA seq
DB search
MATSEKQNTLDYINQMFPTEASLSGVEPLMQKIHSEIRRVDAEILTAVRQQSNSGTKARE
DLAAATSAVQELMNKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQVMASKRHYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKSIKQVLKSHV
FSDFSSLGTGKETEESNLLQQLSDACLVVDALEPSVREELVKNFCNRELTSYQQIFEGAE
LAKLDKTERRYAWIKRRLRTNEEIWKIFPRSWHVDYLLCIQFCKLTRSQLVEILVSMKEK
PDVATLLTALQRTLEFEEELAEKFGGGTRSKDAVDDNEETERSGNKSQTVSDIRKKYEKK
LAAHDGSQHEEQDGQKDTLVPGAGFNFRGIISSCFEPHLSVYIELEEKTLMDSLEKEMLE
ETWEIDEGSQTNILSSSIKVFVIIRRSLKRCSALTKNQTLFNLFKAFQKVLKAYATKLFA
RLPKGGTGIVAAATGIEGQIKTSDKDERVICYIVNTAEYCHRTCGELADNVSKLIDAQFA
DRVDMSEVQDEFSAVITKSLITLVHGIETKFDSEMLAMTRVPWSTLESVGDQSDYVNGIN
LILTSSIPVLGSLLSPIYFQFFLDKLASSLGPRFYHNIFKCKQISETGAQQMLLDTQAVK
TILLEIPSLGKQTAGAASYSKFVSREMSKAEALLKVILSPIDSVADTYCALLPEGTLAEF
QRLLELKGLKKADQQSILDDFNKRGSGISQPTIMSASAVPSAPNTSIAPAITNVASSPGV
ITSREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccgaaaagcagaatacattggattacatcaaccagatgtttcctacagaa
gcatctctatctggtgttgagccccttatgcagaagatacatagtgaaattcgtcgtgtt
gatgccgaaatattgactgctgttcggcaacagagtaactctggaaccaaagccagagaa
gatcttgctgcagctacgagtgctgtgcaggaactcatgaataagattcgagaaattaaa
accaaagcagagcaaagtgaaacaatggttcaagaaatatgtcgcgatattaagaaattg
gattttgcaaagaagcacataacaacaacaattactgcccttcaccgcctaaccatgcta
gtatctgcagtagagcaacttcaagtaatggcttccaaacgtcactataaagaggcagct
gcacagcttgaggctgtaaaccagctctgtagtcattttgaagcctatagggatattcct
aagattacagaacttagagaaaagtttaagagcatcaaacaggtcctcaagtcacatgtg
ttctctgacttttccagtttaggcacagggaaggagacagaagaaagtaatcttttacag
cagttatcagacgcatgcttagttgttgatgctctcgagccttctgttagagaagagttg
gtgaagaatttttgtaatagagagctcacctcttaccagcagatatttgaaggagcagaa
ctagctaaattggacaaaactgaaagaagatatgcttggatcaagcgtcggctaagaaca
aatgaggagatttggaaaattttccctcgttcatggcacgttgattatttgctctgcatc
cagttctgcaagttgacaaggtctcaacttgtggaaatccttgttagtatgaaagaaaag
ccagatgtagcaaccttgttaacagctctgcagcgcactttggaatttgaggaggagtta
gccgagaaatttggtggtggaacccgcagcaaagatgctgtagatgacaatgaagaaaca
gaaaggagtggaaacaagagtcagacagtttcagacattaggaaaaagtatgagaaaaag
cttgctgctcatgatggcagtcaacatgaagaacaagatggacaaaaagatacattagtg
ccgggagctggtttcaatttccgagggatcatctcgtcgtgctttgaacctcacttgtca
gtttatatagagctggaagagaagactcttatggatagtttggagaaagaaatgctggaa
gagacatgggaaattgatgagggaagtcagactaatattttgtctagcagtattaaggtc
tttgtaataatcaggaggagcttgaagcgatgcagtgctttgacgaaaaaccagacatta
tttaatctctttaaggcatttcaaaaagttcttaaagcttatgctacaaagcttttcgct
agattgccaaagggcggtacaggaattgttgcagctgccacgggaatcgaaggacagata
aagacttcggacaaggatgaaagggttatctgctatatagtaaatactgcagagtattgt
cacagaacgtgcggagagttagcggataatgtgtcgaagctgattgatgctcaatttgca
gatagagtggatatgtctgaagtacaggatgaattttcagcagttatcacaaaatcattg
attacattagtgcatggaatagaaacaaagtttgactctgaaatgctagcaatgacccgg
gttccatggagtactctcgaaagtgttggtgatcagtcagactatgtcaatggcatcaat
ttgatccttaccagtagcattccagtgctcggaagccttctctctcccatttacttccaa
ttcttcctggataagcttgcgtcatctcttggtccacggttctatcacaacatcttcaaa
tgcaaacagatatcagagactggagcacagcaaatgcttttggatacgcaagcggtaaaa
actattttgctggaaattccttctctcggaaaacaaacagcaggagctgctagctattca
aaatttgttagtcgtgagatgagcaaagcagaagcattattgaaggtcatactgtctcca
atagattctgtggcggatacatactgtgcgctgctgccagagggaacactcgcagagttt
cagcgtcttttggagcttaagggcctgaaaaaagctgatcagcagagcatactggatgac
ttcaacaaacgtgggtcaggcatctctcagccaaccatcatgtctgcttcagctgtacca
tctgctccaaacacctcaatagcaccggcaataactaacgtcgcatcatcacctggggtc
atcacttcaagagaagatgtgctgacaagagcagctgctcttggaagaggtgcagctact
acaggctttaaaagattccttgctttaacagaagctgcaaaagatcgcaaggatgggccg
ttcaggaagctatttaatgcatga
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