KEGG   Lycium barbarum (goji berry): 132616126
Entry
132616126         CDS       T09483                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03020  RNA polymerase
lbb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132616126
  09124 Replication and repair
   03420 Nucleotide excision repair
    132616126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbb03021]
    132616126
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132616126
Transcription machinery [BR:lbb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     132616126
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132616126
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 132616126
NCBI-ProteinID: XP_060186705
LinkDB
Position
10:complement(122844022..122849535)
AA seq 215 aa
MADKGKGFSMPNAGKSPASKGKDDSSAKSKRGRRVQFDSEGSLDTNSTKSNGKADIPSFK
GDSGKGGKGEKAGSSGKSQKAKDPGPVELRVEQELPDKTTCLMDCEAAAILQRCQEQMVI
LSEDPTIKLPVSFDRGLTYAQRNKLYDDPQAVKQILKPLKAYGVSDGELCMIANFHVESV
DEIFALVPSFKTKKSKLRVPLENVLAELVKLRRAA
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctgacaaaggaaaagggttttctatgccaaatgctggaaaatctcctgcatccaaa
gggaaggatgatagctcagcgaagtccaaaagaggaaggagagttcagtttgattctgaa
ggatcgcttgataccaattccacaaaatcaaatggaaaagctgatataccatctttcaaa
ggtgattctggtaaaggagggaaaggagagaaagctggcagtagtggtaaaagtcaaaaa
gcaaaagatcctggtcctgtggagctcagagttgagcaagaacttccggacaaaacaaca
tgcctgatggactgtgaagctgctgctatcttgcaaagatgccaagagcagatggtgata
ttgtctgaagatccaactataaaactacctgtttcatttgacaggggattgacatatgca
caaaggaacaagctttacgatgatccccaagctgtcaaacaaatactcaagcctctaaaa
gcgtatggcgtttctgatggggagctctgcatgattgccaactttcacgtggaatctgtt
gatgaaatatttgctcttgttccctcgtttaagactaagaagagcaagctgagagttccc
cttgagaatgtcttggctgaactagtcaaacttagaagggcagcataa

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