Lycium barbarum (goji berry): 132616135
Help
Entry
132616135 CDS
T09483
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132616135
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
132616135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
132616135
NCBI-ProteinID:
XP_060186713
LinkDB
All DBs
Position
10:complement(124862426..124881228)
Genome browser
AA seq
1993 aa
AA seq
DB search
MWTNVFKIGGLHQISWFQFLPHEADVNSLVDKSVKLDKKEAATWLVLSSHLQLQKEGFLS
TWTNSFVGPWDPSQGLYNPDEKIKLWLFFPGKHSSVVEKAHSAVSKLRVLASGLWVAPGD
SEEVAAALSQALRNCMERTLRGLSYVRYGDVFTKYRPFSQNEELFRKGQPVVEFIFAATE
EAIFVHVIISAKHIRALSSGDIDKISENTSNVSGEGLPVIVSPHGMRGRLTGCCPADLVK
QVYLSSGKLSASNGVVGLPCNASQSGYQLKGQNCYVEVSLGCTAPENNNIQESSNVQNNS
SRPTITEASAMANVVQGKIPDNCGKMLIYPPEAVLVPVMQTACARSSLKRFWLQNWIGPS
LSFTSSFMHCFDFHSDAKVNSLDGSWLDANVIRSNRRYNSSSNSNSSSVSSISTSSSDSD
YKTSGTGDLEADADSLMCRQSGLSSLDRSQNDNLKMGFKRSRTGISESFSQGGAVINSST
SDYASMEVNNSAITGGNDQSGLEWGWDDDDRVGMDIQALLSEFGDFGDFFENDALPFGEP
PGTAESQALMFPAADSVDVGSSPGPSMMDVQDQMLLPVGFPSFDSFNQPPPPAILDDSLS
KHQEVIKSATVANQVNSASASIAGEFDHLIKAEALISFAPEYGAVETPRGENTHSIFRNP
YVPKSREVETANSSSNSYVYSATPPLSPCFDASEEKSGVTVNLKTGTGRHDTSSILQSKK
YYTHVESGKEKNDDKLSGSVHSGATHEAQVGQSPFSGFNSTNSVKCIHNKTEKANEGLLK
SGSSGQSMKTVLATEVECLMCQAFMCKIRHTLLSSSSYLPVGMSRMSGCTVINQSQGEAV
VTMDNMSSKSEMRKKELIPVRIAGDIDGGLLDGTLNAPVAATNSPVGVWRSVGVSKGMKQ
PSAGLESCHSIQHNSFIEESMLAYGLRQPLQELLDGMALLVQQATSLVDVALDADSNDGS
YGWLALQEQWRRGFSCRPSMVHAGCGGVLASCHSLDVAGVELIDPLSADVQASFTLTLLQ
NDIKTALKSAFGTMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISL
SVGEPISPSQSSAGGSSSLRDGIRVDEASERRLSQDTCLSESEQLPGSRLRPTLAAVPYP
AILVGYQDDWLKTSPSSLQLWEKAPFEPYAMPKHMTYHVVCPDINALTTAATDFFQQLGT
VYETCKLGTHSPQCMGNEMEIDSGKIASSGFVLIDCPQSMKIDSSGASMLGSISDYFLSL
SNGWDLESYLKSLSKVLRNLKLTSCMTMNPKEGSTGPCTVIYVVCPFPEPLAVLQTVIES
SIAVGSVVLSSDKERRSTLHNQVGKALSYSAAVDEALSNVLTLSGFCIPKLVLQIVTVDA
VFRVTSPALSELVILKEIAFTVYNKARRISRGSSSDMVQSSSMSGRSHPGLMQMNSPVPG
MWKDCPRSIGTSLQREADLDASLRPGSWDNWQTSRGGGLGCEPNRIGDFSCQDETRYLFE
PLYILAEPGSLDRGLSFPMSGNPMAESSKLLLDDGTSGSFMQSSASSGGGDTGLNTQSET
SEPDGFGSAHQKSLPSLHCCYGWTEDWRWLVCIWTDSRGELLDNHIYPFGGISSRQDTKG
LQSLFVQILQQGCQILQACPPEAAIAKPRDFVIARIGCFLELECQEWQKALYSVGGSEVK
KWSLQLRRSVPDGMTTASSNGTSLQQQEIGLIQERALPSSPSPLYSTHSKASSFMKGGLG
QPSTRKQLIGGQGIADNSRGLLQWVQSISFVSLSIDHSLQLMFQADSMSHGTSQSSGIMS
QPGYLEGYTPVKSLGSTSTSYILIPSPSMRFLPPVSLQLPTCLTAESPPLAHLLHSKGCA
IPLSTGFVVSKAVPTMRRDARSISKEEWPSVLSVSLVDYYGGSNIIQEKFLKGVSKVGGR
GTGSETRDVEIATHLILENIAAELHALSWMTVSPAYLERRSALPFHCEMVLRLRRLLHFA
DKEVSRQPEKSQV
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgtcttcaagatcggtggcttacatcaaatatcttggtttcagtttctt
cctcacgaagccgatgttaactctctagtggacaagagtgtgaagctggataagaaagaa
gctgccacatggctcgtactctcgtcgcatctacaactgcagaaggaagggtttctcagc
acatggaccaattcctttgttggaccttgggacccatctcagggtctttacaaccctgat
gagaagatcaagctctggctttttttccctgggaagcattcatccgttgttgaaaaggca
cactcagctgtgtccaaattaagagttttggcatctggtctctgggtggctcctggagat
tcagaagaggttgctgctgcgctatctcaggccttaaggaattgcatggaaagaacgctc
agaggactttcatatgttagatatggagatgtatttacaaaataccgtccattttctcag
aatgaagagttattcagaaagggacagccagtggttgagttcatatttgctgctacggaa
gaggctatctttgtccatgttattatatctgcaaagcatatacgagcactttcaagtggt
gacattgataaaatatcagagaatacatctaatgtctccggtgaggggcttccagttatt
gtctcacctcatggaatgcgtgggaggcttactggatgttgcccagctgatcttgtgaag
caagtgtatcttagttctggcaagcttagtgcttcaaacggcgttgttgggctaccatgc
aatgcttctcaatctggttatcagcttaagggccagaattgctatgttgaagttagcctt
ggttgcactgcaccggaaaacaacaatatacaagaaagttcaaatgtacagaataattca
tccaggcctaccataactgaagcctctgcaatggccaatgttgttcagggtaaaatacca
gataactgtggaaaaatgcttatttacccccccgaggctgttcttgtcccagtgatgcaa
acagcatgtgcgagatcatctctaaaaagattctggctgcagaactggattgggccctca
ttgtcctttacatcctcctttatgcattgttttgattttcatagtgatgccaaagtcaat
tcgttggatggttcttggcttgatgcaaacgtcatacgctctaatcggcgttataacagt
agtagtaatagcaatagtagtagtgttagcagcataagtacttcttctagtgatagcgat
tacaagacctcaggaactggtgatcttgaagcagacgctgattctttgatgtgtagacag
tctggattatcctctttggatcggtctcaaaatgacaatcttaagatgggctttaagagg
tcgagaactgggatttcagagtcatttagtcagggaggagcagtgataaattcatcaaca
agtgactatgcctcaatggaagtaaataattctgcaattactggaggaaatgatcagagt
gggcttgagtggggttgggatgatgatgatagagtaggcatggatattcaggcacttctg
tcagagtttggagattttggtgacttctttgagaatgatgctttgccatttggagagcct
ccaggaactgcagagtctcaggctcttatgtttcctgcagcagatagtgtggatgttggt
agcagccctggtccttcgatgatggatgtgcaagatcagatgcttttaccagtaggtttt
ccatcgtttgatagctttaatcaaccaccaccgccagcaattctggatgattcgctgagc
aaacatcaagaagttataaaaagcgccacagttgctaatcaagtaaacagtgcttccgca
tctattgctggtgaattcgatcacttaattaaagctgaagctctgatatcattcgctcca
gagtatggagcagttgaaacccctagaggtgagaacacccattcgattttcaggaatccc
tatgttccgaagtcccgggaagtggagactgcaaattcaagctcaaatagctatgtctat
tcagcaaccccacctttgtcgccttgctttgatgcatctgaggagaagtctggtgtgact
gtaaacctcaaaacaggcactggaaggcatgatacaagctccattcttcaatcaaagaaa
tattacactcatgttgaaagtggaaaagagaaaaatgatgataagttgtctggctctgta
catagtggcgctacacatgaggctcaagtaggacaatctccgttttctggttttaattcg
accaattctgttaaatgtatccacaataaaaccgagaaagccaatgaagggctactaaaa
tcaggcagctctggtcaatcaatgaaaactgtgctagcgacagaagttgaatgccttatg
tgccaagcatttatgtgtaagatacggcatactctattatcttcaagcagctaccttcct
gttggcatgagcaggatgtcagggtgtaccgttataaatcagtcacaaggtgaagcagtg
gttacaatggacaatatgtcaagcaaatctgagatgaggaagaaagaattaataccagtt
aggatagcgggtgatattgatggaggattactggatggaacccttaatgcaccagttgcc
gccactaattcaccagttggcgtttggcgctctgttggagtttccaagggaatgaagcaa
ccatcagctggtttagaatcttgtcactcaattcagcataattctttcattgaggaaagt
atgctagcttatgggctacgtcaaccgcttcaagaacttcttgatgggatggctttactt
gtgcagcaagctacatctcttgttgatgttgcactagatgccgatagcaatgatggttct
tatggttggctcgcactgcaggagcagtggaggcgtggcttttcatgtcgaccatccatg
gttcatgcaggttgtgggggagtattggcttcctgtcattcgctggatgttgctggtgtg
gagcttattgatccactttcagctgatgttcaggcatcatttaccctcactctgctgcag
aatgatataaaaacagctctgaaatctgctttcggtactatggaaggtcctttatctgtt
gttgattggtgcaaaggtcgcagtcaatcaaatgatgggggaatatctggtgatggtttt
tctgcagagtccactgcaagtgcaagtgagtgtcgagattcttcaagtaccatatcattg
tctgttggagaacctataagtccatctcagtcctccgctggtggatcatctagtttgagg
gatggaattagggtagatgaggcaagtgagcgcagattaagccaagacacttgtctatca
gagtcagagcagctaccaggctcaaggcttaggccaacattggctgcagtaccgtatcct
gctatacttgttggataccaagacgattggcttaagacatcacctagttctcttcagctc
tgggaaaaggcaccttttgagccttatgcaatgcccaagcatatgacatatcatgttgtc
tgcccagacatcaatgctctaacaacagctgcaactgattttttccaacagcttggaact
gtttatgagacatgcaaacttggaactcattcacctcaatgtatgggaaatgagatggag
atagattccggcaagattgcatcttctggttttgttctgattgattgccctcagtcaatg
aagatagacagcagtggtgcatctatgctgggatcaatcagtgattatttcctatccctt
tccaatggatgggatttagaaagctatttgaagtctctctcaaaagttctcagaaattta
aagcttacatcatgcatgaccatgaatccgaaagaaggaagtactggtccatgtacagtg
atatacgtggtttgccctttccctgagcctcttgcagttttacagacagtgatcgaatct
tctattgctgttggatcagtggttctttcttcagacaaagagaggcgatctacgctgcac
aatcaagtcgggaaggccttaagttactcagcagctgtggatgaggcactctcaaatgtt
ttaacactttctgggttttgtatccctaagttggtattgcagattgtcacggttgatgca
gtttttagggttacaagccctgctctgagtgagcttgtcatactgaaggaaattgctttc
acagtttataacaaagcccgcagaatatctcgagggtcctccagtgacatggttcagtcg
tcatccatgtctggtagatctcatcctggcctgatgcaaatgaattccccagttccaggg
atgtggaaggactgtcctcgaagcataggaacctcccttcagagagaggctgaccttgat
gcaagcctaaggcctggtagttgggacaactggcaaacatctagagggggaggtctcgga
tgtgagccaaacagaattggggatttttcttgtcaagatgaaactcgttatttgtttgag
cccctttacattcttgctgaaccaggttcgttggatcgtgggctttcattcccgatgtcg
ggtaatccaatggctgaatcttcaaagcttttattggatgatggtacaagtggaagtttt
atgcagagttcagcttcttcaggtggtggagacactggactaaacactcagtctgaaaca
tctgaaccagatggctttggatctgcacatcagaaatcacttccaagcttgcattgttgt
tatggatggactgaggattggcgctggctggtgtgtatatggacagattccaggggagaa
ctgcttgataatcatatatatccatttggcggaataagtagtaggcaggatacgaaaggt
ctgcaatctttgtttgtgcaaattttgcaacaaggatgccagatacttcaggcatgtcct
cctgaggctgccattgccaagcctagggattttgtcattgctcgtattggatgcttcctt
gagcttgaatgccaggaatggcagaaagccctgtattcagttgggggatctgaggtgaag
aaatggtctctgcagctaaggcgatctgtgcctgatggaatgactactgcaagtagtaat
ggtacatccttgcagcaacaggaaataggtctgattcaagaaagagcacttccttcctcc
cctagtccattgtacagtactcactcaaaggcttcctcttttatgaaaggtggcttaggt
caaccatccacaaggaagcagttaattggtggacagggtatagcggacaactccaggggc
ttactccaatgggtgcaaagcattagttttgtctctctttctattgatcattccttacag
cttatgttccaagcggattcaatgagtcatgggacaagtcaaagtagtggcattatgagc
cagccaggttatcttgaaggttatactccagttaagtcccttggttctacgtccacctcc
tacattctaatcccgtcacccagtatgagattcctacctcctgtcagtcttcagcttccc
acttgcctgactgctgaatcaccaccacttgcccatcttctccacagcaagggatgtgcc
attcccctttcaacaggttttgtcgtttcaaaagcagtacctactatgaggagagatgca
aggagcatctcaaaagaagaatggccctcagttctttctgtcagcctcgttgattactat
ggtggcagtaacatcatccaagaaaagtttttgaagggtgtcagtaaggttgggggaagg
ggtacaggctcggaaacaagagacgttgaaatagcgactcacttgattctcgagaacata
gctgcagagctccatgctttatcatggatgactgtaagtccggcatacttggagagacga
tctgctttgccttttcattgtgagatggtattaaggcttcgaaggctgcttcactttgcc
gataaggaagtttctcggcaacctgagaaaagccaagtttag
DBGET
integrated database retrieval system
