Lycium barbarum (goji berry): 132616152
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Entry
132616152 CDS
T09483
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132616152
03036 Chromosome and associated proteins [BR:
lbb03036
]
132616152
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
132616152
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132616152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
132616152
NCBI-ProteinID:
XP_060186743
LinkDB
All DBs
Position
10:39189753..39230109
Genome browser
AA seq
1481 aa
AA seq
DB search
MEDEEEKIPIEMEQEHVEKTSSDDCFINDDDDDDDDDQHSLPEEPLTEKEIEELVSELIE
VESKAAEAQEALEEESLSKVEADVREELAQSLTGDELENAVADEMATFKENWEGALDDLE
TESAHLWEQLDGAGIELPNLFKWIESQAPHGCCTEAWKNRTQWVGSELTNDVTGAIADAE
KYLQIHRPVRRRHGKVLEEGASGFLAKKLAGDEGCEAQGGSNDVDWGSFSKLCSDNPSSS
MGTISFGSKDWASVYLASTPQQAAELGLKFPGVDEVEEIDDIEDSSVDPFVADAIANERE
LKLSEEQKRKFKKVKEEDDLKTDLKLQRRLKQRRHRNRQTLEEIQKETTDDINGSLSQDD
EDAPKSNEVKLVIDATSKWLHEIDDEAKGLKRFHNSEEMEPQSKKSRITTLDSDEEDHRI
TTLDSDEEDHPGERLSPACSLSETGDQSNPQKDGDNVLPVSSLLVCNEKQNFRCTACDKV
AVEVRAHPLLKVIVCLDCKTSMKAKMQDVDCSECYCRWCGRCSDLLSCKSCKRLFCSVCI
RRNLGEEILLGIKTSGWQCCCCSPSILHPLVSVLEKIMESQGLVDSSTDTDSDNSDASDA
DVNGHKSSTKRRRKKKIRRILDDTELGEETKRKIAIEKERQERLKSLGAKFSSKTMFMDS
ADCCKSSYESGSLEMLGDVETGYIVNVVREEGEEAVRIPPSISSKLKSHQVAGIRFMWEN
IIQSIRKVKSGDKGLGCLLAHTMGLGKTFQVISLLYAAMRSVDLGLKTALIVTPVSVLHN
WRQEFVKWRPSEMKPLRVFMLEDVPRERRAEYLQKWRLKGGIFLIGYTAFRNLSFGKHIK
DRHVAREICQVLQDGPDILVCDEAHIIKNTRADVTQALKQVKSQRRIALTGSPLQNNLME
YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTADDVKIMNQRSHILYEQLKGFVQR
MDMNVVKMDLPPKTVYVMSVKLSPLQRKLYKRFLDVHGFTKDKVSGEKIMKRSFFAGYQA
LAQIWNHPGILQLIRENRACSRPEDPVEILLADDCSSDENTYYTMVPGEKPSSNNEALRK
NHNGFLHGDWWNDLLEKNCKEVDYSGKMVLLLDILTMSSNAGDKALVFSQSLFTLDLIEL
YLSKLLRPGKKGKYWKRRKDWYRIDGKTESSERQRLVDCFNDPLNRRVKCVLISTRAGSL
GINLYAANRVIIVDGSWNPTHDLQAIYRAWRYGQTKPVFAYRLLAHGTMEEKIYKRQVTK
EGLAARVVDRQQVHRTISKEEMLHLFEFGDDEDIPLDLKQVREHAGEANATVDVGSVPKQ
KSTLPNGSSSDKLMQSLIDRHHPRWIANYHEHESLLQENEDEKLSKEEQEMAWEVYRRSI
EWEERRVSPNEPVVERQHVSITESLPKQKPVVSSATIWPPEDSNLVFSMGSSRCRFVPRK
CTNLSHLLTLRSQGTKWGCSTVCGECAQEISWEGLNSKLAK
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaagaggaaaaaatacccattgaaatggaacaagaacatgtagaaaagact
tcttctgatgattgtttcattaatgatgatgatgatgatgatgatgatgatcaacattct
cttcctgaggaaccattaactgagaaggaaattgaggagctcgtttctgagctaatagaa
gttgagagtaaggctgcagaggctcaagaggctttagaagaagagtcattatctaaagtg
gaggctgatgttagggaagagttggcacaatctcttacaggagatgagttggaaaatgcc
gtagctgatgaaatggcaaccttcaaagaaaattgggaaggtgctctcgatgacctggag
actgagagtgctcatttgtgggaacaactggatggtgctggaattgaactcccaaatctc
tttaagtggatagagagtcaggctcctcatggttgctgcactgaagcatggaaaaacagg
actcagtgggttggctctgagttgacaaatgacgtcactggagcaattgctgatgctgag
aagtatcttcaaatccacagacctgtaagaaggcgacatggaaaagtcttggaggagggt
gccagtggtttcttggcaaaaaaacttgctggagatgaaggctgtgaggctcagggaggg
agcaacgatgtagattggggctctttcagcaaattatgctctgataacccatcttcatct
atgggtactatttcatttggcagcaaagattgggcctctgtttacctcgctagtacacca
cagcaagctgctgaactgggactaaaatttcctggagttgacgaggttgaggagattgat
gatattgaagacagttctgttgatccatttgttgcagatgccattgcaaatgaaagagag
ctaaaactttctgaagagcagaagaggaagtttaagaaggttaaagaggaagatgatcta
aaaactgatctgaagcttcagagacgtttaaaacagagaagacacaggaacagacagacg
ttggaggagatacagaaagaaacaacagatgacatcaatggttccttgtctcaagatgat
gaggatgcaccaaaaagcaatgaagtcaaattggttatcgatgccacttcgaaatggcta
catgaaattgatgatgaggccaaagggttgaaacgttttcacaactctgaagaaatggag
ccgcagagtaaaaagtctcggatcactacactagatagtgatgaggaggatcatcggatc
actacactagatagtgatgaggaggatcatcctggggaaaggttgtctcctgcatgcagt
ttgagtgagacaggagatcagtcaaatccacaaaaggatggagataatgtgcttccggtt
agttcccttcttgtgtgcaatgagaagcaaaattttcgctgcactgcttgtgataaagtg
gcagttgaagtacgcgcacatcctcttttgaaagttatagtttgcctggactgcaaaact
tcaatgaaagcaaagatgcaggatgttgattgctcagaatgctactgcagatggtgtggg
cgttgcagtgatctgttaagttgtaaatcatgcaaaaggttattttgtagtgtgtgtata
aggaggaaccttggtgaagaaattttgttgggaattaaaacatctggttggcaatgctgc
tgttgctccccaagtatcctgcatccattggtttcagtgttggagaagatcatggaatct
caaggtttggtagattctagtacagacacggattcagataactcagatgcttcagatgct
gatgtcaatgggcataaaagcagcaccaagagaagacgtaaaaagaaaattagaagaatc
cttgatgatactgagttaggggaggagacaaaaaggaaaattgccattgaaaaggaacgc
caagaacgcctcaaatctctgggggcaaaattttcgagcaagactatgttcatggattct
gcggattgttgcaaaagctcgtatgaaagtggtagcctagaaatgcttggtgatgttgaa
actggttacatagttaatgtggtgagggaggagggagaagaggctgtcaggattccgccc
agcatctcatcaaaactgaaatctcaccaggttgctgggattcgatttatgtgggaaaat
attattcaatctatcaggaaagtcaagtctggggataaaggtcttggttgcctcctagct
catactatgggtcttggtaaaacgtttcaggtgatttctctcttgtatgctgctatgaga
agtgtggatttaggattgaaaactgctctcatagtcacacctgtaagtgttctgcataac
tggcggcaggaatttgtaaaatggagaccatcagaaatgaagcctcttcgtgtctttatg
cttgaagatgttccaagggagagaagggccgagtatctccaaaaatggagattaaaaggt
ggtattttcttaattggctatacagctttcagaaatttgtcatttgggaagcatataaag
gatcgtcacgtggccagagaaatttgtcaggtccttcaggacgggcccgacatacttgtt
tgcgatgaggctcatattatcaagaataccagagctgatgtaactcaagccttgaaacaa
gtcaagagccagagaaggattgcattaactggatctcctcttcaaaacaatttgatggag
tactattgtatggttgattttgtaagagaaggatttcttggcagcagccatgaatttaga
aaccgctttcagaatccgatagaaaatggtcaacacaccaattctacagctgatgatgtt
aagattatgaatcagcgatctcatattctctatgaacaattaaaaggatttgttcaaaga
atggacatgaatgtcgtaaagatggatttgccgccaaaaactgtctatgtgatgtctgta
aaactctctcctttacagagaaaattgtataaaagatttttagatgttcatggcttcacg
aaggacaaggtttctggtgaaaagataatgaagagatccttttttgccgggtaccaagcc
ttggctcagatatggaaccatcccgggattttgcaactgattcgagaaaacagagcctgt
agtcggcctgaagatcctgttgagatccttcttgctgatgattgctcaagtgatgagaac
acatattatactatggttcctggagagaagccaagtagcaacaatgaagctctcagaaaa
aatcataatggcttcctccatggggattggtggaatgatcttctagaaaaaaattgcaaa
gaagttgattacagcggcaaaatggttctgctactcgacatcctgactatgagctctaat
gctggtgacaaagcacttgtgtttagtcagagcttgtttaccctagatctcattgaacta
tatctttcaaaactactgcgcccagggaaaaaggggaagtattggaagcggcggaaagac
tggtacaggattgatgggaaaacagagtcatctgaaaggcagagacttgttgactgtttt
aacgacccattgaatagaagggttaaatgcgttttgatatctactagagctggatctctg
ggtatcaacctttatgctgccaaccgtgtaattatagttgatggctcttggaatccaact
catgatcttcaagctatatatcgagcttggaggtatggtcaaacaaaacctgtttttgct
taccgtttactggcacatggaacgatggaggaaaagatatacaagcgtcaggtaacgaag
gaaggccttgcggcacgggtggttgatcggcaacaagtgcatagaactatatccaaagag
gaaatgttgcatctttttgaatttggagatgatgaagatatacctctggatttgaagcaa
gtaagagagcatgccggtgaagcaaacgcaactgtagacgttggaagtgttccgaaacaa
aaatcaactcttccaaatggaagttcttctgacaagctaatgcaaagtttgattgacagg
catcatccgcggtggattgcgaattatcatgaacatgagagtctcttgcaagagaacgag
gacgaaaaactatcaaaagaagagcaggaaatggcgtgggaagtgtaccggagatctatt
gaatgggaagagaggcgagtttcgcctaatgaacctgtagttgagcgtcagcatgtctct
atcactgaatcgttgccaaagcaaaagccagtagtttccagtgccaccatttggccgcca
gaggacagtaatcttgtgttttcaatgggtagttcaagatgccgttttgtgccaaggaag
tgcacgaacctatcacatttgcttacacttagaagtcaaggcacaaaatggggttgcagc
actgtttgtggggagtgtgctcaagagataagttgggagggacttaacagcaaattagca
aagtga
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