KEGG   Lycium barbarum (goji berry): 132616185
Entry
132616185         CDS       T09483                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03013  Nucleocytoplasmic transport
lbb03015  mRNA surveillance pathway
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132616185
  09122 Translation
   03013 Nucleocytoplasmic transport
    132616185
   03015 mRNA surveillance pathway
    132616185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132616185
   03041 Spliceosome [BR:lbb03041]
    132616185
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     132616185
    TREX complex
     132616185
Spliceosome [BR:lbb03041]
 Complex C
  Other components
   EJC/TREX
    132616185
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    132616185
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 132616185
NCBI-ProteinID: XP_060186778
LinkDB
Position
10:complement(123750085..123756358)
AA seq 274 aa
MASLDMTLDDMIKSRRNSEKGGRGQGRARRGRGAGGSFRGGRTTGAPPRKGQLGVNARPS
ANRIAKSFRRTKNLPWQNGLLEDSLRAAGLSSSGLESGTKVYVSNLDVGVTNSDIRELFS
EMGELIRYAIHYDKNGRPSGSAEVVFARRSDAYQALKRYNNVQLDGKPMKIEVVTPKPDI
PLSARADVGRANGRRTVVMTPGSARGRGGASSVNRGSSQRGRGGFGNTSGRGRGRGRGGR
GRGGRGKKNGVETSAEDLDKELENYHANAEAMQT
NT seq 825 nt   +upstreamnt  +downstreamnt
atggcttccttggatatgactcttgatgacatgataaaaagtaggagaaatagtgagaaa
ggaggtaggggacaaggcagggcccgacgtggaagaggggcaggaggatcatttagaggt
ggaagaacaacaggagctcctcctcgtaaaggacaacttggtgtaaatgctcggccatct
gccaacagaattgccaagtctttccgcagaacgaagaatttgccatggcagaatggcttg
cttgaagatagtcttagagctgcagggctatcatcatcaggattagagagtggtactaag
gtgtatgtttccaacttggatgttggagtcacaaattcagatataagggaactcttctcc
gagatgggtgaactgatacgatatgcaatccactatgacaaaaatggtcgcccaagtggc
tcagcggaggtggtttttgccaggaggagtgatgcatatcaagcacttaaaagatacaac
aatgttcagttggatgggaagccaatgaagatagaagttgttactcccaagccggacatt
cctttatcagctcgtgcagatgttggacgagcaaatggaaggagaacggttgtcatgacg
ccgggctcagctcgtggaagaggtggtgcatcttctgtcaatcgtggttcaagtcaaagg
ggccgtggtggttttggtaatacatcgggacgtgggcgtggtcgaggacgtggaggacgc
ggtcgtggtggtagggggaagaagaatggtgttgagacgtcggcagaagatcttgacaag
gagctggaaaactaccatgctaatgcagaagctatgcagacctaa

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