Lycium barbarum (goji berry): 132616185
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Entry
132616185 CDS
T09483
Name
(RefSeq) THO complex subunit 4D-like
KO
K12881
THO complex subunit 4
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
lbb03015
mRNA surveillance pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132616185
09122 Translation
03013 Nucleocytoplasmic transport
132616185
03015 mRNA surveillance pathway
132616185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132616185
03041 Spliceosome [BR:
lbb03041
]
132616185
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132616185
TREX complex
132616185
Spliceosome [BR:
lbb03041
]
Complex C
Other components
EJC/TREX
132616185
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132616185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
132616185
NCBI-ProteinID:
XP_060186778
LinkDB
All DBs
Position
10:complement(123750085..123756358)
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AA seq
274 aa
AA seq
DB search
MASLDMTLDDMIKSRRNSEKGGRGQGRARRGRGAGGSFRGGRTTGAPPRKGQLGVNARPS
ANRIAKSFRRTKNLPWQNGLLEDSLRAAGLSSSGLESGTKVYVSNLDVGVTNSDIRELFS
EMGELIRYAIHYDKNGRPSGSAEVVFARRSDAYQALKRYNNVQLDGKPMKIEVVTPKPDI
PLSARADVGRANGRRTVVMTPGSARGRGGASSVNRGSSQRGRGGFGNTSGRGRGRGRGGR
GRGGRGKKNGVETSAEDLDKELENYHANAEAMQT
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttggatatgactcttgatgacatgataaaaagtaggagaaatagtgagaaa
ggaggtaggggacaaggcagggcccgacgtggaagaggggcaggaggatcatttagaggt
ggaagaacaacaggagctcctcctcgtaaaggacaacttggtgtaaatgctcggccatct
gccaacagaattgccaagtctttccgcagaacgaagaatttgccatggcagaatggcttg
cttgaagatagtcttagagctgcagggctatcatcatcaggattagagagtggtactaag
gtgtatgtttccaacttggatgttggagtcacaaattcagatataagggaactcttctcc
gagatgggtgaactgatacgatatgcaatccactatgacaaaaatggtcgcccaagtggc
tcagcggaggtggtttttgccaggaggagtgatgcatatcaagcacttaaaagatacaac
aatgttcagttggatgggaagccaatgaagatagaagttgttactcccaagccggacatt
cctttatcagctcgtgcagatgttggacgagcaaatggaaggagaacggttgtcatgacg
ccgggctcagctcgtggaagaggtggtgcatcttctgtcaatcgtggttcaagtcaaagg
ggccgtggtggttttggtaatacatcgggacgtgggcgtggtcgaggacgtggaggacgc
ggtcgtggtggtagggggaagaagaatggtgttgagacgtcggcagaagatcttgacaag
gagctggaaaactaccatgctaatgcagaagctatgcagacctaa
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