Lycium barbarum (goji berry): 132616213
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Entry
132616213 CDS
T09483
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00520
Amino sugar and nucleotide sugar metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
132616213
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lbb01003
]
132616213
Enzymes [BR:
lbb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
132616213
Glycosyltransferases [BR:
lbb01003
]
Polysaccharide
Structural polysaccharide
132616213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF948
DUF2564
Motif
Other DBs
NCBI-GeneID:
132616213
NCBI-ProteinID:
XP_060186809
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All DBs
Position
10:complement(122773268..122782335)
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AA seq
678 aa
AA seq
DB search
MKMKLRKPVLSLLLITVLAPIVLYTDTLGTYFNSPSSSRTEFIEDLSTFSFGGDVRPLNV
LPQESSTSLKEPPGDVYSDTISNASDTISSEDARKARQLTEAESLKHQTATGNNDSGVEV
AMNENQISQVTDNLHEPQQVDKKSPKLVSAGKSESRAMETSSKKKTSPTDSDHTLDATSA
KMEIRHDQRTVQTSGRVASGETTRSKVEERSTQVVPPDARVRQLKDQLIRAKVYLSLSAT
RNNPHFIRELRLRVKEVTRSLGEATKDSDLPRSANERLKTMEQTLAKGKQIQDDCATIVK
KLRAMLHSAEEQLRVHKKQTLYLTHLTAKTLPKGLHCLPLRLSTEYFKLNSSQQLFPRQE
NLENPKLYHYALFSDNILAAAVVVNSTVSHAKDPSKHVFHIVTDRLNFAAMRMWFLANPP
QYATVDVQNVEEFTWLNSSYSPVLKQLESQSMIDYYFRSRADSDPNVKFRNPKYLSIMNH
LRFYLPEIFPKLDKVLFLDDDIVVQKDLGGLWSLDLKGKVIGVVETCGESFHRFDRYLNF
SNPLISKNFDPRACGWAFGMNIFDLNEWRRQNITEVYHSWQNQNHERLLWKLGTLPPGLI
TFWKRTYALDRSWHVLGLGYNPNVNQKDIQRAAVIHYNGNLKPWLEISIPKFRDYWSKFV
DYDQVFLRECNINKLAGS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaactgaggaaaccggttttgtcgttgttgctaattactgttcttgcccct
attgtcctttacaccgacactcttgggacttatttcaattctccttcttcatcgaggacg
gagttcattgaagatctgtccaccttttcttttggtggtgacgtccgacctcttaatgtg
ctgcctcaggagtcatccacatcactcaaagaaccaccgggcgacgtatattcagacacc
atttctaatgcctcggacaccataagcagcgaggatgctcgtaaagcaagacaactaact
gaagcagaatcattgaaacatcaaactgccactggaaacaacgacagtggagtagaagtg
gctatgaatgaaaatcaaataagtcaggttactgataacttgcacgaaccgcaacaagtc
gacaaaaaatcaccaaaacttgtttcagctgggaaaagtgaaagcagagcaatggaaacc
agctcaaagaaaaagacgagtccaacagattctgaccacaccttggatgccacatctgcg
aaaatggaaataaggcatgatcaacgcactgttcaaaccagtggtagagttgcatctgga
gagacaaccaggagcaaagttgaagagcggagtacacaagtggttccccctgatgctcgt
gttcgccagcttaaggatcagctcattagggcgaaggtctacctttcactttcagcaaca
cgaaacaacccccacttcattagagaacttcgtttgcgggtgaaggaagtaacacgatca
cttggtgaggccactaaggattctgatctgccaaggagtgccaatgagaggttgaagaca
atggagcaaacattggccaaagggaagcaaattcaagatgattgtgctactattgtaaag
aagcttcgtgccatgcttcactcagcagaagagcagcttcgtgtccacaagaagcaaaca
ttgtatttaacacacttaactgctaagacacttccaaagggtcttcattgtcttcctttg
cgcctttcaacagagtatttcaagttaaattcgtcccaacagctttttccacgtcaagag
aatttagaaaatcccaagctgtaccactatgcactcttctcagacaatatattagcagct
gccgtcgtcgtaaactcaactgtttcgcatgcaaaggatccttcaaagcacgttttccat
atagtaacagacaggcttaattttgcggcaatgagaatgtggtttttggcaaatccaccg
cagtatgctacagtagatgttcaaaatgttgaggaattcacctggctaaattcaagttac
agtccagttctgaagcaattggaatctcagtccatgatagattattacttcagatctcgt
gctgattctgatccaaatgtgaagtttaggaatccaaagtacctttcaatcatgaatcac
ttgcgcttttacttaccggagatcttcccaaagctggataaagttctcttcttggatgat
gatattgttgtgcaaaaggatctcggtggactttggtcgcttgatcttaagggtaaggtg
attggtgtggttgagacttgtggagaaagctttcatcggtttgaccgctacctcaacttc
tcaaatcctctcatctccaaaaattttgatccccgtgcttgtggttgggcatttggaatg
aacatctttgatctgaatgagtggaggcggcaaaacatcacagaggtgtatcactcatgg
caaaatcagaatcatgaaagactactctggaagttagggaccctaccacctggcttgata
accttttggaagcgcacatatgcccttgaccgatcgtggcatgtccttgggcttggctac
aatcccaatgttaaccagaaggacattcaacgagcagcagtcatacattacaacggaaac
ttgaaaccatggcttgaaataagcatacccaagttccgagactactggtcaaaatttgtt
gactatgatcaggtatttttgcgagagtgtaacatcaataaattggctggttcatga
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