Lycium barbarum (goji berry): 132616223
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Entry
132616223 CDS
T09483
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00270
Cysteine and methionine metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
132616223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132616223
03032 DNA replication proteins [BR:
lbb03032
]
132616223
03036 Chromosome and associated proteins [BR:
lbb03036
]
132616223
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lbb02048
]
132616223
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
132616223
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132616223
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
132616223
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132616223
Prokaryotic defense system [BR:
lbb02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
132616223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
BAH
DNA_methylase
Mak16
Motif
Other DBs
NCBI-GeneID:
132616223
NCBI-ProteinID:
XP_060186824
LinkDB
All DBs
Position
10:complement(75347801..75356648)
Genome browser
AA seq
1549 aa
AA seq
DB search
MGSLAVLDKPDTNAGNKKGKSTQDSVSKRKAPATDKKEKKQPVSETIEEPSAARKRPKRA
AACSDFKEKSLHLSKNSSVIETKKDHCVEEEDVAIRLTGGLQDPQRPCRRLTDFVFHNSE
GVPQPFGMSEVDDLFITGLILPLQDSIDKEKAKGIRCEGFGRIEEWAISGYEDGTPVIWI
STETADYDCLKPSGSYKKFYDHFFAKATACVEVYKKLSKSSGGNPDLSLDELLAGVVRAM
NGLKCFSGGVSIRDFVVTQGEFIYKQLIGLDDTSKKTDQLFVELPVLASLRDESSKQQEM
LAQPEPISSGKALCIGPKAGNGEDKIDQSQEDEDMKLAKLLHEEEYWRSLKQKKGRNTSS
SSSKFYIKINEDEIASDYPLPAYYKTSNEETDEYIVFDSEFDTYHIDDLPRSMLHNWALY
NSDSRLISLELLPMKPCADIDVTIFGSGVMTADDGSGYNFDADANHSSSGSAGPAEIDGM
PIYLSAIKEWMIEFGSSMIFISIRTDMAWYRLGKPSKQYAPWYEPVIKTARLAVSIITLL
KEQSRVARLSFGEVIKRVSEFTKGHPAYISSNVAVVERYVVVHGQIILQQFSEYPDESIR
KCAFVMGLSRKMEERHHTKWLIKKKKVMQRLEHNLNPRASMAPSVKRKAMEATTTRLINR
IWGEYYSNYSPEVSKEVVDNEVKDDEEADEQEENEEDDAPEENLDVPEKTHTPSSTRRNI
KSRSDSKEINWDGESIGKTASGELLFKRARVHGNEIAVGDSVLVEHDEPDELPSIYFVEY
MFEKSDGSKMLHGRMMQRGHDTVLGNAANEREVFLINECINLQLGDVKESVAVNIRMMPW
GHEHRKANADADKLDRAKAEDRKRKGLPTEFYCKSFYRPERGAFFRLPFDKMGLGNGLCY
SCELQRTDQEKESFKLDMSNPSFVYLGTEYSIDDFVYVSPHYFAEERGGSGTFKAGRNVG
LMAYVVCQLLEIVGPKGSKQAKVDSANVQVRRFFRPEDISSDKAYSSDIREIYYSEEIHT
VPVETIEGKCEVRKKYDVSSEDVPAIFDHIFFCEYLYDPSSGSLKKLPAHIKLRYSKINL
DDATSRKRKGKGKEGVDEVGERNETSPQNRLATLDIFAGCGGLSEGLHHAGVTDTNWAIE
YEEPAGDAFKLNYPKAKVFIQNCNVILRAVMQKCGDSDDCISTQEASELAAKMDENELNS
LPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYYRPKYFLLENVRN
FVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKRAFIWAASPEEVLPEWPEP
MHVFGVPELKIALSDTSQYAAVRSTASGAPFRSLTVRDTIGDLPAVGNGACKTCIEYQGD
PVSWFQKKIRGNSITLSDHISKEMNELNQIRCQRIPKRPGADWRDLPDEKVKLSNGQLVD
LIPWCLPNTAKRHNQWKGLFGRLDWDGNFPTSITDPQPMGKVGMCFHPDQDRIVTVRECA
RSQGFPDSYQFAGTILHKHRQIGNAVPPPLAYALGRKLKEAVESKKRSA
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttagcggtgttggataagccagatactaatgctggaaacaaaaagggcaaa
agcacacaagattccgtgtcaaaaaggaaggcacctgcaactgacaagaaggaaaagaaa
cagcctgtttctgaaactattgaggagcccagtgctgcacgcaaaaggcccaagcgagct
gctgcctgttcagattttaaagagaaatctttgcatttatcaaaaaattcttcagtcatt
gaaacaaagaaggaccactgtgtagaggaggaggatgtggctattcggttaactgggggt
ctacaagatcctcagcgaccctgtagaagactaacggattttgtctttcataactcagaa
ggagtaccacaaccttttggaatgtctgaagttgatgatctgtttattactggtctcatt
ttaccactccaggacagtattgacaaagaaaaagcaaagggaattagatgtgaaggcttt
gggcgtatagaagaatgggctatctccggttatgaagatggaactcctgtcatatggatc
tcaacagagacagctgattacgattgtttaaaaccctcaggtagttataagaagttttat
gaccacttctttgccaaggcaacagcttgcgttgaggtttataagaagctgtcaaagtca
tctggaggaaatcctgatttaagccttgacgagttgcttgcaggggttgtccgagcaatg
aatggtttaaaatgcttttcaggtggtgtatccatcagggactttgtggtcactcagggc
gagttcatctataagcaacttattggtctggatgatacatcaaagaagactgatcaactt
tttgttgaactacctgtcctggcttcccttagagatgaaagcagcaagcagcaggaaatg
cttgcacaaccagagcctatatcatctggtaaggctctatgtataggcccaaaagcagga
aatggagaagacaagatagatcaatcacaagaagatgaagatatgaaattggctaaattg
ttacacgaagaggagtactggcgctccttgaagcagaagaaaggccggaatacatcttcc
tcatccagcaaattttacatcaagatcaacgaggatgagattgcaagtgattatcctctg
cctgcatattacaagacatctaatgaagagaccgatgagtatatcgtatttgacagtgag
tttgatacataccatattgatgacttgcctcgcagtatgcttcataattgggcattgtac
aactcggactcaaggctaatttctttagagctcctgccaatgaaaccatgtgctgatatt
gatgtaaccatttttgggtctggagtgatgactgctgatgatgggtctggatacaatttt
gatgctgatgctaatcattcctcttcaggcagtgctggaccagctgagattgatggaatg
ccaatttatttgagtgcaataaaagaatggatgattgagtttgggtcctcgatgatcttt
atatctattcggactgatatggcctggtataggcttgggaagccgtcaaaacagtatgct
ccttggtatgaaccagtcataaagaccgcgaggctggcagtgagcatcattactttgtta
aaggaacagagtcgtgtggctagactttcttttggagaagttattaaaagggtttcagag
ttcacgaaaggccatcctgcttatatatcatctaatgtagctgtggtggaaagatatgtg
gttgtacatgggcagattattctgcagcaattttctgaatatcctgatgaaagcattagg
aagtgtgcatttgtgatgggtctctcaaggaaaatggaagagaggcaccatacaaaatgg
ctgattaagaagaagaaggttatgcagagacttgaacacaacttaaatcctagagcatct
atggcgccatctgttaaaaggaaagctatggaggctactacgacaaggctaatcaacaga
atctggggggagtactattccaattactcacctgaggtgtcaaaggaggtggtcgataat
gaggtgaaggatgatgaagaagcagacgagcaggaggaaaatgaagaagatgatgctcca
gaggagaacttggatgttccagagaaaactcatacacctagctctacaagaaggaatatt
aagtcacgttctgacagcaaagaaataaactgggatggggaatccataggtaaaacagct
tctggtgaacttttgtttaaaagggctagagttcatggaaatgagattgctgttggggat
tcagttctagtggaacatgatgaaccagatgaacttccttctatttactttgttgaatac
atgtttgaaaaatcggatggtagcaaaatgcttcatggaagaatgatgcaacgaggacat
gacacagtacttggaaatgcagctaatgagagagaggtatttttgatcaatgaatgcata
aatctgcaactaggagatgtcaaagaaagtgtagctgtcaatatcagaatgatgccttgg
ggacatgagcatagaaaagcgaatgctgatgctgataaacttgacagagcaaaagcagaa
gaccggaagaggaaaggattgccaacagaattttattgcaaaagcttttatcgccctgaa
agaggtgctttcttcagactcccatttgataagatgggtcttggtaatggtttatgctac
tcgtgtgagttgcagcgaactgatcaggaaaaggaatcctttaagttggatatgtccaac
cccagttttgtatatctggggactgagtattcaattgatgactttgtttatgtaagtccc
cattactttgctgaagaaagagggggaagtggaacttttaaagctgggagaaatgtgggg
ttgatggcctatgtagtatgtcaattactagaaattgttggtcccaagggatctaaacaa
gctaaagtagattctgcaaacgtccaagtcaggagattcttcagaccagaggacatttct
tcagataaggcatactcttctgatattcgggagatatattacagtgaggaaatacataca
gttccagtagaaacaatcgaaggtaaatgtgaagtgagaaagaagtatgatgtttcctct
gaagatgtccctgccatcttcgaccatattttcttttgtgaatatttgtatgatccatcg
agtggatcccttaaaaagttaccagcacatataaagctgagatactcaaaaattaaccta
gatgatgcgacatctaggaagaggaaggggaagggcaaagaaggagtggatgaagttggg
gaacgaaatgaaacttctccacagaatcgtttagccacactagatatctttgctggttgt
ggtggcttgtctgaagggctgcatcatgcgggtgtcacagatacaaattgggcaattgaa
tatgaagagcctgctggagatgcatttaaacttaactatccaaaggcaaaggtgttcata
cagaattgtaacgtgattctgagggctgtcatgcagaagtgtggagattctgatgactgt
atctcaactcaagaggcttctgaattagctgcaaaaatggatgagaatgaactgaatagc
ttgccactgcctggacaagttgatttcataaatggaggccctccttgtcaggggttttct
ggaatgaatagatttaatcagagcacctggagtaaagttcagtgtgagatgattctggcg
tttttatcttttgctgattattatcggcctaagtacttcctcttggagaatgttaggaat
tttgtgtcgttcaaccaaaaacaaacatttcgcttaactgttgcatctcttcttgagatg
ggttatcaggtgaggtttggtatccttgaagctggagcattcggagttcctcagtctagg
aagagagcatttatctgggctgcctccccagaggaggttcttccggagtggccagaacca
atgcatgtttttggtgtcccagaattaaaaattgcattatctgatacttcacagtatgca
gctgtgaggagtactgcaagtggagctccattccgttctcttactgtcagggacacaatt
ggagatcttcctgctgttggcaatggggcatgcaagacttgtatagagtatcaaggtgat
cctgtatcctggttccaaaagaaaattagaggcaactcaataacattatccgatcacatt
tcaaaagagatgaacgagcttaaccaaatcaggtgccaaagaattcctaagcggccagga
gctgattggcgtgaccttccggatgaaaaggttaaactatctaatggtcaactggttgat
ttgattccatggtgcctgcctaatactgctaagaggcacaaccagtggaaggggctcttt
gggaggttggattgggatgggaacttccccacttccattactgatccccagccgatgggt
aaagtggggatgtgctttcatccagaccaagacaggattgttacagttcgtgaatgtgca
cgttctcaaggtttcccggacagctaccaatttgctggtaccattttacacaagcacagg
caaataggaaatgctgttccacctcctttggcatatgcacttggaaggaaacttaaggaa
gcagttgagagcaagaagaggtccgcttag
DBGET
integrated database retrieval system
