Lycium barbarum (goji berry): 132616489
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Entry
132616489 CDS
T09483
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132616489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132616489
03051 Proteasome [BR:
lbb03051
]
132616489
Membrane trafficking [BR:
lbb04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
132616489
Proteasome [BR:
lbb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
132616489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
UBA_7
TBK1_ULD
Dsc3_N
Ubiquitin_5
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
132616489
NCBI-ProteinID:
XP_060186894
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All DBs
Position
11:114449618..114463429
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AA seq
554 aa
AA seq
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MSTGNGDASSTAAADCEGVTINIRCSSGSKFTVQVRLDSTVGSFKSKLAEHANIAVEQQR
LIYKGRILKDDQILQSYGLEADHTVHLVRGSAPAPSANPGSATNAGGPNTVQNAPRDAAS
DAGGPFPGPGLGASMFPGLGSAAGGGGLFGAGLPDFEQVQQQLTQNPDMMRDMLNMPLVQ
NLMNNPETIRNMIMNNPQMREIMDRNPELAHVLNDPATLRQTMEAARNPEIMREMMRNTD
RAMSNIESSPEGFNMLRRMYENVQEPFLNASTLSGDARNDVGSNPFAALLGAQGGGQGRQ
QSNNPPTTGSETTDNVPAPNTNPLPNPWASAGTGAAQANTTARSNTAGDTRAAPPGLGGL
ASPGLEQMLGGMPGTGGMPDTTSLNQMMQNPAVSQMMQSLLSNPQYMNQVLGLNPQLRSM
LDSNPQLREMMQNPEFIRQLTSPETMQQLATFQQGLASQLGQQQTNQQPGQNAGGAALGN
PGMEMLMNMFGGLGTGGLGVPNRPNVPPEELYATQLTQLQEMGFFDTQENIRALTATAGN
VHAAVERLLGNLGQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccggcaacggagatgctagttctacggcggcggcagactgcgaaggtgttacg
attaatatccgatgttcaagcgggtcgaaatttacggttcaggttagacttgattcaacg
gttggatcgtttaagtcgaaacttgcagaacacgcaaacattgctgttgaacaacagaga
ttgatctataaaggtcggatcttaaaggatgatcaaattttacaaagttacggtctggag
gcggatcacactgttcatttggttcgaggttctgccccagctccctctgcaaaccctgga
agtgcaaccaatgctggaggtccaaatactgttcagaatgcaccacgagatgctgcttct
gatgcaggtggaccatttccaggaccaggccttggagcttcaatgtttcctggtcttgga
agtgctgctggtggtggtggtttgtttggagctgggcttccagattttgagcaagtccag
cagcagttaactcaaaaccccgacatgatgagagatatgttgaatatgcctcttgttcag
aatttaatgaataaccctgaaaccatccgcaacatgatcatgaacaatccccaaatgcga
gagatcatggatcgtaatcctgagcttgctcacgtactcaatgatcctgctactcttcga
cagacaatggaggctgcacgaaaccctgaaattatgcgtgagatgatgcgcaatacagac
agggccatgagcaatattgaatcttctcctgagggatttaacatgctgaggcgtatgtat
gaaaatgtccaggagccattcctaaacgcatcaacattgtctggagatgcaagaaatgat
gtggggtctaacccatttgcagctcttttgggagcacaaggtggtggacaaggcagacag
cagtcaaacaatcctccaactactggttctgagacaactgataatgtgcctgccccaaat
actaatccacttcctaatccttgggcatctgcaggcactggagctgcccaagccaatacc
actgctaggtcaaatactgctggcgataccagggctgcaccacctggcttaggtgggctt
gcttccccaggtttggagcaaatgctaggtggcatgcctggtacaggtggcatgcctgat
accacttctctaaatcaaatgatgcagaaccctgccgtctcacaaatgatgcaatctctc
ctttcaaatcctcagtacatgaaccaggttttagggctgaacccacaacttagaagcatg
ctcgattccaacccacagcttagagaaatgatgcaaaatcctgaatttattcgtcaattg
acatcacctgagacaatgcagcaacttgcgacttttcagcaagggcttgcatctcaactt
gggcaacagcaaacaaaccaacagccggggcaaaatgctggtggagcagcacttggaaac
ccgggaatggaaatgcttatgaacatgtttggtggacttgggaccgggggcttgggtgtc
cccaacagacctaatgtgcccccagaggaattatacgctactcagctaacgcagttacaa
gaaatgggtttctttgacactcaagaaaatatccgcgcactgactgctactgcaggcaat
gttcatgctgcagtagagcgacttctcggaaatcttggacagtag
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