Lycium barbarum (goji berry): 132616584
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Entry
132616584 CDS
T09483
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbb01002
]
132616584
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132616584
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132616584
Peptidases and inhibitors [BR:
lbb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132616584
Ubiquitin system [BR:
lbb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132616584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
DUF1955
Motif
Other DBs
NCBI-GeneID:
132616584
NCBI-ProteinID:
XP_060187072
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All DBs
Position
11:9255557..9265731
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AA seq
683 aa
AA seq
DB search
MGYYLQMNWQPNLRRKTGPPLGLKNLGNSCYLNSVLQCLTYTPPLAYFCLKSQHSSSCDS
GAAAASEKKNECPFCILEKRIARSLSLESALDTPAKINNCLKIFAQHFRYGRQEDAHEFL
RYVIDACHNTCLRLKKLQQQRRKGGGGGADGNGNTIVKEIFGGALQSQVKCLSCGAESNK
VDEIMDISLDVLHSSSLKDALQRFFQPEVLDGNNKYKCENCKKLVTARKQMSILQAPNVL
VIQLKRFEGIYGGKIDKPIAFEEVLVLSSYMCKASQDLHPEYNLFGTIVHSGFSPDSGHY
YAYIKDAVGRWYCCNDSCVSLSTLQEVLSEKVYILFFSRTKQRSPPTKTCLSLNGSKSNH
SNGLAKSKISTFDLAKAENGKQVLGHSSDKENVMTSKVSKVHSSPVRELNTFERSSIKKI
PTSGNIKIVVHQRKSGDRTGDMRASVLTEKEVTSLPERNGVSKSCGNGQMTRSHALTNGN
GKLPIVATNSIADGPHKDYGGSNGKAAGRDPYHEEVTRSSSLANGNGKIQSVATDTLRGS
LHRNNGENSEGLAARISVNKEMPNGHVESSSVSGSKRKSPDQCILLEQDAQSRAKVEELK
KELYKEASLVLRTCGWSEEVYAFMRTKKSGAQSDFEASDMNAMKKLLIADAKPMFISRIP
ESLKGSLIKRLTSFSQGTPPSST
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggctattatttgcaaatgaattggcagccgaacctgagacgcaaaactggtcctcca
ttagggcttaaaaaccttggcaattcctgttatctcaattctgtccttcagtgcctcact
tatacccctccacttgcttatttctgcctcaaatctcaacattcctcttcttgtgattct
ggagctgcagctgcttcagagaagaagaacgaatgtcctttttgtatattagaaaagcga
atagctaggtctttgagtctcgagtcagcactagatactccggccaagattaataattgc
ttaaagattttcgcccagcattttaggtatggaagacaagaggatgcccatgaattcttg
cgctatgtcattgacgcctgccacaatacgtgtttgcggctgaagaaattgcagcaacag
agaaggaagggtggtggaggtggtgctgatggaaatgggaataccattgttaaggagatc
tttgggggtgctttgcagagccaggttaagtgcttgtcatgtggtgctgagtcaaataag
gtggacgagatcatggatataagtcttgatgtattgcacagcagctcactcaaggatgct
ttgcagagattttttcagcctgaggttttggatggcaacaataagtacaagtgcgagaac
tgtaagaaattggtgacagcaaggaagcaaatgtcaattcttcaagcaccaaatgttctt
gtcattcagctcaagaggtttgaaggaatatatggtgggaagattgataagcccattgct
tttgaggaggttctagtgctttcaagctacatgtgcaaagcgagtcaggatctgcatcca
gaatacaatctttttggaactattgtccactcaggcttttcaccagattcagggcactat
tatgcatatatcaaggatgctgtgggtcgttggtactgctgtaatgattcttgcgtttct
ctttcaaccttgcaagaagtgttgtcggagaaggtgtacattcttttcttctctcgtacc
aaacagaggtcaccacccaccaagacatgtctatcacttaatgggtcaaagtccaatcat
tccaacggcttggctaaatccaaaatctcgacttttgacttggcaaaagcagaaaatggc
aaacaagttttaggccactcctctgacaaagaaaatgtaatgacgtctaaggtcagtaaa
gtgcattcaagcccagtgagggagttgaacacatttgaaagatcttccatcaagaagata
cctacctctggtaatattaaaattgttgttcatcaaagaaaatctggcgatagaaccggt
gatatgagagcatcagttcttacagagaaagaggttacatcattaccagagaggaatggt
gttagcaaaagttgtggtaatggccagatgacaagatcacatgccttaacgaatggaaac
ggaaaacttccaattgtagcaaccaactcaatagcagatggtccccataaagattatggt
ggaagtaatggaaaggctgcaggaagggatccataccacgaagaggtgactagatcatca
tctttagcaaatggaaatggcaaaatccagagtgttgcaactgatacattgaggggaagt
ctgcatagaaataatggggagaatagtgaaggcctagcagcaagaatttctgtaaacaag
gagatgcccaatggccatgttgaatcgtcttctgtatcaggttcaaagagaaaatcacca
gatcaatgcattctgcttgagcaagatgctcagtctcgtgcaaaggtggaagaattaaag
aaagagctctataaggaagcttcattagttctaagaacatgtggttggtcagaagaagtc
tatgcttttatgcgtacaaagaagtcaggggcacaatcagactttgaagcatcagacatg
aatgcgatgaagaagttattgattgcagatgccaaaccaatgtttatctcacgaattcct
gaatcattgaagggtagtcttattaaacgcctaacatcatttagtcaaggaacaccaccc
tccagtacctaa
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