KEGG   Lycium barbarum (goji berry): 132616671
Entry
132616671         CDS       T09483                                 
Name
(RefSeq) protein VACUOLELESS1
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    132616671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lbb04131]
    132616671
Membrane trafficking [BR:lbb04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    132616671
   Hops complex
    132616671
SSDB
Motif
Pfam: Vps16_N Vps16_C WD40_WDHD1_1st
Other DBs
NCBI-GeneID: 132616671
NCBI-ProteinID: XP_060187223
LinkDB
Position
11:complement(10110241..10122760)
AA seq 843 aa
MAAVTVAAEWQLLYNRYYRKPELYQMQWKHVDLTRNKVACAPFSGPIAVIRDDAKIVQLY
AESALRKLRIFNCAGIQISETVWKNPGGRLIGMHWTDDQMLICITQDGTVYRYNVHAEAI
EPNSQLTLGVDCFTHSVVECVFWGNGVVCINEAFQVYCIPDFNNPKPIKLADTGLEDFPL
CMAVIEPQYTMSGNVEVLMGVADHVLLVEEDGVQEVGLGIGPLQKMVVSQNGKLLASFTH
DGRLLVMSTDFSSIIFEYPCESALPPEQLAWCGMDSVLLYWDDMLLMVGPYGDPVRYFYD
ESVLLIPECDGVRILSNMSMEFLHRVPDSTVSIFQIGSTLPAALLYDALDHFDRRSAKAD
ENLRLIRSSLPEAVEACIDAAGHEFDVSQQRTLLRAASYGQAFCSHFQRDCIQEMCKTLR
VLNAVRRPDIGIPLSIQQYKLLTPAVLIARLINAHRHLLALQISEYLSMNQEVVVMHWAS
TKITASAAIPDATLLEMLLDKLKICKGISYAAVAAHADKNGHRKLAAMLVEHEPRSSKQV
PLLLSIGEEDTALTKATESGDTDLVYLVLFHIWQKRPALEFFGTIQARPLARDLFVNYAR
HYKHEFLKDFFLSTGQLQDVAFLLWKESWELSKNPMASKGSPLHGPRIKLIEKAQHLFAE
TREYVFESKAAEEHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAVKVKTE
FKVSEKRWYWLKVFALATKRDWDALEKFSKEKKPPIGYRPFVEACVDADEKGEALKYIPK
LTDPRERAEAYARIGMAKEAADAATQAKDNELLGRLKQTFSQNSAASSIFDTLRDRLSFP
SVS
NT seq 2532 nt   +upstreamnt  +downstreamnt
atggcggcagtaacagtagccgcagaatggcaacttctctacaatcgttactaccgtaaa
cccgaactttaccaaatgcaatggaagcacgttgacctcacgcgaaacaaagtcgcgtgc
gctccattctcgggtccaatcgccgttatccgtgacgatgctaaaatcgttcagctttac
gcggaatcagctctccgtaaactccgtatcttcaattgcgctggaattcagatttctgaa
acagtttggaagaatccaggtggtagattaattggtatgcattggactgatgatcaaatg
ctaatttgtataactcaagatggtactgtttatcggtataatgttcatgctgaagcgatt
gagcccaattctcagcttaccttgggagtggattgttttactcatagtgttgttgagtgt
gttttttggggaaatggtgttgtttgtatcaatgaggcgtttcaggtttattgtatacct
gatttcaacaatccgaaaccgatcaaactagcggatactggtctggaggattttccttta
tgtatggctgtgattgagccacagtatactatgtctggaaatgtggaagtattaatgggt
gttgctgatcacgtgttgttggtggaagaggatggtgttcaggaggttggacttggaatt
gggcctctacagaaaatggtggtttcccaaaatggaaagcttttggcatcttttacacat
gatgggaggcttcttgttatgtccacggatttctccagcatcattttcgagtatccttgt
gagtcagccctaccccctgagcagctagcttggtgtggaatggacagtgtactactctac
tgggatgatatgcttctaatggtgggtccttatggagatcctgtccgctatttttatgat
gaatcagtcctccttatccctgaatgcgatggggttagaatactctccaacatgagtatg
gaatttcttcatcgagttccagattcaacagtctccatatttcagattggtagcacatta
cctgcagctctgctttatgatgccttagatcattttgacaggcggagtgccaaggccgat
gagaatctgagactgatacggtcttcgctgcccgaggcggttgaagcatgtattgatgca
gcaggtcatgaatttgatgtttcacaacaacgtacgcttttaagagcagcaagctacggc
caagccttttgcagccattttcaacgggattgcattcaagagatgtgtaaaaccttacga
gtcctaaatgctgtacgtcgcccagatattggcattcctctcagtattcagcagtataag
ttgcttacacctgctgttctgattgctcgtcttattaatgctcatcgccaccttcttgca
cttcaaatatcagaatatcttagtatgaatcaggaagttgtagtcatgcactgggcatct
acaaagataacagcatcggcggcaatccctgatgctactcttctagagatgttacttgat
aagctgaaaatatgcaaggggatatcttatgctgcagttgctgctcatgcggataagaat
ggtcatcggaagttagctgccatgcttgttgaacatgaaccacgttcatctaagcaggtt
cctctcttgctaagcattggagaagaggatactgctctaacgaaggcaactgaaagtggt
gatactgatctggtttatcttgtcctcttccatatctggcagaagagaccagctttggag
ttctttgggacaatacaggccagacctctagctcgtgacttgtttgttaattatgcacgg
cattacaagcacgaatttttgaaggactttttcctatctactgggcaacttcaggatgta
gcttttctgttatggaaagagtcatgggaattgtctaaaaatccaatggctagcaaagga
tctccacttcatggtccaagaataaaactcattgagaaggcccagcacctttttgcagaa
acaagggaatatgtttttgaatcaaaagctgctgaagagcatgcaaaattgctaaggatg
caacatgagttggaggtgactacaaaacaggccatctttgtggattcaagtataagtgat
acaattcgtacatgcattgtgctggggaaccatcgtgctgccgtgaaagtcaaaacagaa
tttaaggtatccgaaaagcgatggtattggcttaaagtttttgctctggcaactaaaagg
gattgggatgccttggaaaagttttcaaaggagaaaaagccaccaattggttaccgccca
tttgtcgaggcatgtgttgatgcagatgagaaaggtgaagcactaaagtatataccaaag
ctgactgatcctcgggaaagagcagaggcttatgctcgaattggaatggctaaggaggct
gctgatgctgctacgcaggctaaagataacgaattacttgggaggttgaagcaaacattt
tctcaaaattcagctgcttcatccatttttgacacactgcgagaccggttatccttccca
agtgtttcttga

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