Lycium barbarum (goji berry): 132616726
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Entry
132616726 CDS
T09483
Name
(RefSeq) aconitate hydratase, cytoplasmic-like
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00020
Citrate cycle (TCA cycle)
lbb00630
Glyoxylate and dicarboxylate metabolism
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
lbb01200
Carbon metabolism
lbb01210
2-Oxocarboxylic acid metabolism
lbb01230
Biosynthesis of amino acids
Module
lbb_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
lbb_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
132616726
00630 Glyoxylate and dicarboxylate metabolism
132616726
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
132616726
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
132616726
NCBI-ProteinID:
XP_060187313
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All DBs
Position
11:3371081..3380225
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AA seq
1003 aa
AA seq
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MIMYLSTCRSSSSSSLSLSSKLRFASTVSTITIIPWSSSTSAVSRTLYSPSLSRHIQPAS
FSVTYSSFRCSVPCWSYRRSPINLTAQIRTESPVFKRLERNIATMMASEHPFKRIFTSLP
KPGGGEFGKFYSLPALNDPRIDKLPFSIRILLESAIRNCDNFQVTKDDVEKILDWENTAP
KQVEIPFKPARVLLQDFTGVPSVVDLASMRDAMKELGSDPDKINPLVPVDLVIDHSVQVD
VARSESALQANMDIEFQRNKERFAFLRWGSTAFRNMLVVPPGSGIVHQVNLEFLGRVVFN
ADGVLYPDSLIGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQSMSMVLPGVVGFRMTGKL
RDGVTATDLVLTVTQMLRKHGVVGKFVEFYGPGLASLSLADRATIANMSPEYGATMGFFP
VDHMTLQYLRLTGRSEETITMIEEYLRANKIFVDYSEPQEERVYSSYLEFDLADVEPCVS
GPKRPNDRVALKDMKADWHACLDNKQGFKGFAVPKQEQDKVAKFTFHGLPAELKHGSVVI
AAITSCTNTSNPSVMLGAGLVAKKACELGLEVKPWIKTSLAPGSGAVTKYLHKSGLEKYL
NQQGFNLVGYGCTTCIGNSGELDESVASAITDNDIVAAAVLSGNRNFEGRVHPLTRANYL
ASPPLVVAYALAGTVDIDFEKEPIGNGKDGKSVYLKDIWPSNEEIAEVVQSSVLPEMFKS
TYEAITQGNPFWNQLTVPSANLYAWDPNSTYIHQPPYFKGMSVDPPGPHGVKDAYCLLNF
GDSITTDHISPAGSIHKDSPAAKYLMARGVQRKDFNSYGSRRGNDEVMARGTFANIRIVN
KLLDGEVGPKTIHIPTGEKLYVYDAAMRYKSEGHVTIVLAGAEYGSGSSRDWAAKGPMLL
GVKAVIAKSFERIHRSNLVGMGIIPLAFKPGGDAETLGLTGHERYTIDLPQRISDIRPGQ
DVTVTNDSGKSFTCTLRFDTEVELAYFEHGGILPYVIRNLSKQ
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtatttatccacttgccgttcatcatcatcatcatcattatcattatcttcc
aagcttcgctttgcttccactgtctctactataacaataataccttggtctagttcaact
tcagctgtttctagaaccttgtattcaccttcactttcccgccatattcaacctgcttcc
ttttctgttacttactcatcattcaggtgctcggttccttgttggagttatcgacgttct
ccgatcaatctaacggctcagattaggacagagagtcccgtttttaaacgcctggaacgc
aatatagctactatgatggcttcagaacatcctttcaaacgaatatttactagtcttccc
aagcctggaggtggcgagtttggaaaattctacagtcttcctgctctaaatgatccaagg
attgacaagctgcctttttctataaggatactgttggaatctgctatacggaattgtgac
aattttcaagtaaccaaggatgatgtcgagaagatcctggactgggaaaatactgcacca
aagcaagttgaaattccatttaagcctgcccgtgttttgctacaggattttactggagtt
ccatctgtggttgatcttgcctctatgcgtgatgctatgaaggagcttggtagtgatcct
gacaagatcaatcctttggttccagttgaccttgtaattgaccactcagtacaagttgat
gtggcaagatcggaaagcgcgttgcaggctaatatggatattgaattccagagaaacaaa
gagaggtttgcttttctcagatggggttccactgcgttccgcaacatgctggttgttcct
cctggttctggtattgttcatcaggttaatttggagttccttggacgagtagttttcaac
gcagatggtgtactttatcctgatagtctaattgggactgattcacacacaacaatgatt
gatgggttaggagttgctggatggggagttggtggaattgaagcagaggcagcaatgctt
gggcagtcaatgagcatggttttgcctggtgtcgtcggctttagaatgactggaaaacta
cgtgatggggtgacagctactgatttggtcttaactgtaactcaaatgttaagaaagcac
ggtgttgtcggaaagtttgtggagttctacggtccaggactagcctcactatcattggct
gatagggcaacaattgcaaatatgtctcccgagtacggagctaccatgggtttcttccct
gtagatcatatgaccttacagtaccttagattaactggacggagtgaggaaacaataaca
atgattgaggagtacttgcgggcaaacaaaatttttgttgattacagcgagcctcaagag
gagagagtttactcatcttatttggaattcgatcttgctgatgttgaaccctgtgtctcg
ggaccaaaaaggccaaatgatcgtgtcgctctcaaagatatgaaagctgattggcatgct
tgcctcgataacaaacaaggattcaagggatttgctgtccccaagcaggagcaagataaa
gttgcaaaattcacattccatggactgcctgctgaacttaagcatggtagtgtagttata
gctgctataacgagctgcactaatacatctaatccaagtgtcatgcttggagctggtctt
gttgcaaaaaaagcctgtgaattaggtttggaggttaaaccatggataaaaacaagtctg
gctccaggttcaggggctgtcacaaaatacctccataagagtggcctagaaaagtacctg
aatcagcagggcttcaatcttgttggctatggttgcacaacttgtatcggtaattctgga
gaacttgatgaatcagttgcttccgccatcactgacaatgacattgtagctgcagctgtg
ctttctggaaataggaactttgaaggccgtgttcaccccctaacaagagctaattatctt
gcttcgccaccgctggttgtcgcatatgcacttgcaggaacggtggacatagatttcgag
aaggagcctattggaaatggaaaagacggaaaaagtgtttacttaaaggacatatggcct
agcaatgaagaaatagctgaggttgttcaatcaagtgtgctacctgagatgtttaagagc
acttacgaagctattactcaaggaaatcctttctggaatcaactcacggtcccatcggcc
aatctctatgcatgggatccaaactcaacctatatccatcaacccccatatttcaagggc
atgagtgtggatcctcccggccctcatggggtgaaggatgcctactgcttattgaacttt
ggtgatagtatcacaactgaccatatctctccagcaggtagcattcataaggatagtcct
gctgcaaagtatctcatggcgcgtggagttcagcggaaggacttcaattcttatggtagt
cgtcgtggtaatgatgaagtgatggctagaggtacttttgctaacattcgcattgtcaac
aagctcttggacggggaagttggcccaaagaccattcacataccaactggggagaaactg
tacgtgtatgatgcagcaatgagatacaaatccgaggggcacgtcaccattgttcttgct
ggagcagaatatgggagtgggagttcccgtgattgggctgctaagggcccaatgctacta
ggagttaaagcagtgatagctaaaagctttgagaggatacatcgcagtaacctggttgga
atgggcattattccacttgcctttaagcctggtggagatgcagaaacactgggtttaact
ggtcatgagcgttacactattgatcttccacagaggatttctgatataaggcccggacaa
gatgttactgtgactaatgatagtggaaaatctttcacctgtactcttagatttgacaca
gaggttgaactggcatattttgagcatggtggtatccttccttacgtcattcggaacttg
agcaaacagtga
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