Lycium barbarum (goji berry): 132616850
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Entry
132616850 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132616850
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132616850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132616850
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
132616850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
132616850
NCBI-ProteinID:
XP_060187568
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All DBs
Position
11:608167..623079
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AA seq
811 aa
AA seq
DB search
MITGGRSLISSQPAFSNDAKKLLVCTGNTVSIYSTSTGLQIAELEGHKGLVTSVLVVPST
TPAGKILCYCWTASDDGTIKYWDFSVPELMKSIDVQFPIHSMVIPGLSSHPAESSEKPSD
LFAYVSIRVFKEQKGESNALWWQIRKCNLTKSTLIGGVTLAESQNALSITLSPSGRYMGI
CDRRKLRIWEIPTKDSDQAVLQKIRLHHTKTLSTLAFHPTERIVAAGDVTGRILIWRGVG
EHNFSSRNKQRNGGLMKDMEESPGVRGNDDADSCTTRHWHSAEVKVLFFSSDGAYLYSGG
REGVLVVWQLDTGKQKFLPRIGSPLLYFTISSDPSLSSISCADNRIHLLKMPSMEVLRSI
QGIKLRSTLLDRSDGSSEGIVFDSATGLVAIRSENYCIQFYSLFDDREISEVQVCERSHQ
PADEVTVVVDLVALSPEGSVMITVETRLAEEGIGGLVSLKFWSCSSSNKDFSLSTVVYEP
HRDSGILSIAFHPSRHMAVTTSTGPDFKVWVGSQEMRQKDRKQDAGWTCHSVGSYKKKPM
TAAAFSGDGSVLAVAAERVITLWDPEKNILVATVGESLEPISSLAFIGKSEYILTTSQGS
NAQVSVWSMSKLSVSWSYKLKIEAVTCAMDDSLFAILVLLPKSVGSVMSNEATTSSMEGV
ILLFNVGDPVPAASWFVRKAKGSSLAFIRGSPKSEDGVTDGRSVQLLLAYLNIDHEYVLF
DPFNSHNQIHKISRGNLGDLEETGKFGYASIYGDLPEFSLERKEVPSITSVPSERHWETL
FSGPSHNLPPLTKLCSTFLESLLQKRTTAVE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgattacaggtggaagaagcttgatttcttcacaacctgctttctcaaatgatgctaag
aagcttctagtatgcactggaaacactgtttctatttatagcacatcaactggtttacag
attgctgaattggaaggtcataagggattggtgacatcggtgttggtagtaccatctact
actcctgcaggcaaaatattgtgctattgttggactgcatcagatgatggtaccattaaa
tattgggatttttcggtgccggagctgatgaaaagtattgatgttcagtttcctattcac
tcaatggtaattccaggtttatcatcacatcccgcagagagtagcgaaaagccctctgat
ctttttgcatatgtatctatcagagtgttcaaagaacagaaaggagagagtaatgcttta
tggtggcagataaggaagtgtaacttaaccaagtctactttgattggtggagtgactctg
gctgagagtcaaaacgcactgtctataacacttagcccctctggaagatacatgggcatc
tgtgacaggcgcaaacttcgcatatgggaaataccaacaaaagattctgatcaagcagtg
cttcagaaaatcagattacatcatacgaaaaccctgagcactctagcttttcatccaaca
gagagaattgttgcagctggagatgtaactggaaggatattaatatggaggggtgttggg
gagcataatttctcatctagaaataaacagagaaatggaggactaatgaaggatatggag
gaaagccctggtgttaggggaaacgatgatgctgattcttgtaccacaaggcattggcac
tctgcagaagtgaaagttctctttttttcttctgatggcgcctatctctactcaggtggg
agagaaggagttctcgtggtttggcagttagacacagggaagcagaaattcctcccgcga
ataggatccccccttttgtattttaccatctcatctgatccttctttgtcctctatatct
tgtgcagataaccgaatccaccttcttaaaatgccttcgatggaggtgttgagatccatt
caaggaatcaagcttcgtagcacacttctggataggtctgatggctcatctgaaggaatt
gttttcgactctgccacgggactagttgccatacgttcagaaaattactgtatccagttc
tatagcttgtttgatgaccgtgagatttctgaggttcaagtttgcgaaagaagccaccaa
ccagctgatgaagtcacggtggtagtggatttagttgctctctctccagagggttctgtc
atgattactgtagaaaccaggcttgctgaagaaggaataggaggtcttgtaagtctgaag
ttctggtcgtgcagctcttcaaataaagacttcagcttatccactgttgtctatgagccc
cacagagattctggtattttgtccattgctttccatccttcacgtcacatggctgttacc
acctcgacgggtcctgatttcaaggtttgggtcggaagtcaggagatgcgacaaaaagac
cggaagcaagatgctggatggacatgccattctgttggttcttacaagaaaaagccaatg
acagctgctgccttttccggagatggttctgtgttggctgtagctgcagaaagagttatt
acgttgtgggatccagagaagaatattcttgtggcgacagttggggagagtcttgagcca
atttcttccttagcgtttattgggaagtcggagtatattttaaccacatcgcaaggttct
aatgcacaagtatcagtgtggagcatgtcaaagctgtctgtatcatggtcttacaagctt
aagatagaagctgtaacttgtgcaatggatgactccttgtttgccatcctggtccttctc
ccaaagtcagttggatctgtgatgtccaatgaagccacaacttcgagtatggaaggggtg
atcttattattcaacgttggcgatcctgttcccgcagcgagctggtttgtaagaaaggca
aaaggttcttcacttgctttcattcgtggaagtcctaagtcggaggatggtgttactgat
ggcagatcagtgcagttgctgttagcttacctaaacattgatcatgaatatgtgcttttt
gatccattcaacagtcacaaccaaatacataagataagccgaggaaatcttggtgatctt
gaggaaacaggaaagtttggttatgcatctatctatggtgacctaccggaatttagctta
gagagaaaagaagtcccatctatcacatcagtaccatcagaaagacattgggagacacta
ttcagtggaccatctcacaatcttcctcctcttactaaattgtgttccacattcctggaa
tcattattgcagaagaggactactgcagttgagtga
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