Lycium barbarum (goji berry): 132616917
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Entry
132616917 CDS
T09483
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03082
ATP-dependent chromatin remodeling
lbb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132616917
03083 Polycomb repressive complex
132616917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbb03036
]
132616917
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
132616917
Histone modification proteins
HAT complexes
HATB complex
132616917
HDAC complexes
Sin3A-HDAC complex
132616917
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
132616917
PRC2.2
132616917
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
132616917
Heterochromatin formation proteins
Other heterochromatin formation proteins
132616917
Chromatin remodeling factors
NuRD complex
132616917
NuRF complex
132616917
NuRF complex (fruit fly)
132616917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_C
eIF2A
WD40_RFWD3
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
132616917
NCBI-ProteinID:
XP_060187667
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All DBs
Position
11:38451328..38466283
Genome browser
AA seq
488 aa
AA seq
DB search
METTPSSQPKRRGRPKGSSTKSKDEKESHRMRGSVDKRAASVDEKYVQWKSLVPVLYDWF
ANHNLVWPSLSCRWGPIIEQGSLKNRQRLYLSEQTDKSVPNTLIIANCDVVKPRVAAENH
IANFNEEARSPFVKKYKTIIHPGEVNRIRELPQNKNIVATHTDGPEVLIWDIEAQPNKHA
VAGAAASRPDLVLSGHQDNAEFALALSPMEPFVLSGGKDKTVVLWSIQDHISTLAADEPK
SAGSAGSIIKSADNPSIGPRGIFLGHDDTVEDVQFCPSSSQEFCSVGDDSCLILWDARVG
NNPVVKVEKAHDADLHCVDWNPHNDNLIITGSADNSVRLFDRRNLTSDGVGSPVHMFEHH
TAAVLCVQWCPDRSSVFGSSAEDGLLNIWDYEKVGETKDTEAKSEDDPPPGLFFQHAGHR
DKIVDFHWNALDPWTIVSVSDDLETNSGGGTLQIWRMTDLLYRPEKEVLAEMQQFKDHVS
KCAPKSKA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacaccttcttctcaacccaaaaggcgtggcagaccaaagggttcttccacc
aaatccaaagacgaaaaggaatcccacaggatgagaggcagtgttgacaaaagagctgct
tctgttgatgagaaatatgttcagtggaaatcactcgttccagttctctatgactggttc
gctaatcacaacctcgtttggccttccctctcttgcaggtggggtccaataattgagcag
ggttctctgaaaaaccgccagcgactctacctttctgaacagacggataagtcagtgcct
aatactttgatcatcgccaattgtgatgtggttaagcccagggttgcagcagaaaatcac
attgcaaatttcaatgaagaagcacgctcgccatttgtgaagaagtacaaaaccataata
catccgggagaggttaacagaattagagaactcccacagaacaaaaacatagtggcaacc
catactgatggtcctgaagttctcatttgggacatcgaagctcagcctaacaagcatgct
gtcgctggtgctgctgcttcacgtccggatctggtattgagtgggcatcaagacaatgca
gaatttgctctggccctgagccccatggagccctttgtcctctctggaggaaaggacaaa
actgtggtcttgtggagcattcaagaccacatttcaacattggcagcagacgaacccaag
tctgcaggatcagctggctccataattaagtccgctgataatccttcaattggaccacgt
ggtatcttcctgggccatgatgatactgtagaagatgttcagttttgcccttcaagttca
caggaattttgtagtgttggtgatgattcatgcctcatactatgggatgctcgagttggt
aacaatcctgttgtaaaggttgagaaagcgcatgatgctgatcttcattgcgtcgactgg
aatcctcataatgacaatcttatcataaccgggtccgctgataattcggttcgcttgttt
gaccggcgaaatttaacttcggatggggttggatcaccggtacatatgtttgaacatcac
acagccgcagttctctgtgttcagtggtgtccggataggtcttctgtgtttgggagctct
gcagaggatggtctgttaaatatttgggactatgagaaggttggtgaaacaaaagatact
gaagctaaatctgaagatgatcctcctccaggcttattttttcagcatgctggccacagg
gataaaattgtggactttcactggaatgcattggatccatggactattgttagtgtgtct
gatgacttggagaccaacagtggaggcggcacactacagatatggcgcatgactgatttg
ttgtaccggccggagaaggaagtcttggctgagatgcaacagttcaaggaccatgtgagc
aagtgtgctccaaagtccaaagcctga
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