Lycium barbarum (goji berry): 132616972
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Entry
132616972 CDS
T09483
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132616972
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lbb01007
]
132616972
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lbb03016
]
132616972
Enzymes [BR:
lbb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
132616972
Amino acid related enzymes [BR:
lbb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
132616972
Transfer RNA biogenesis [BR:
lbb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132616972
Prokaryotic type
132616972
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
132616972
NCBI-ProteinID:
XP_060187771
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All DBs
Position
11:complement(23575676..23582945)
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AA seq
669 aa
AA seq
DB search
MKYSYVGALGRTMALSLSSSRSLFFTCSKSLSPLNSTFSCFPISSVFLLYPSKNNTSTRN
KLLRCRNSFSTHVSVAADEQTNSDDKIVLPTNESSHGLLRIRHTCAHVMAMAVQKLYPNA
KVTIGPWIENGFYYDFDMEPLTDRDLKRIKKEMDRIISRNLPLVREEVSRDEAQRRIMAI
NEPYKIEILESIQEEPITIYHIGNEWWDLCAGPHVETTGKINKKAVELESVAGAYWRGDV
KKPMLQRIYGTAWENEDQLKAYLHFKEEAKRRDHRRIGQDLDLFSIQDEAGGGLVFWHPK
GAIIRHIIEDTWKKIHMERGYDLLYTPHVAKADLWKISGHLDFYKENMFDQMEIEEELFQ
LRPMNCPYHVLIYKRQLHSYRDFPIRVAELGTVYRYELSGALHGLFRVRGFTQDDAHIFC
LEDQIKDEIRGVLDLTEEILQQFGFDKYEVNLSTRPEKAVGDDEIWEKATSALKDALEDK
GWSYQIDDGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQRFDITYVDSNQERKRPI
MIHRAVLGSLERFFGVLIENYAGDFPLWLSPIQARVLPVTDAQLQYCNEVGKKLKASGIR
VEVCSGERLPKLIRNAEKQKIPLMAVVGPKEAETQTITVRSRFAGELGNMSIDEFIHRTK
TASESRTFL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactcgtatgttggggctctaggaagaacaatggctttatcattatcttcttca
cgctctctcttcttcacttgctctaaatccctttctcctctcaatagcaccttttcttgc
ttcccaattagcagtgtttttcttctttatccgtccaagaacaacactagtactaggaac
aagttgctgagatgtcggaattctttctcaacacatgtttccgtcgccgccgatgaacag
acgaatagtgatgacaaaatagttctgcccactaatgaatcatcccatggactccttcga
attcgccacacgtgtgctcatgtaatggccatggcagtccaaaagctctacccaaatgca
aaagtgacgattggtccctggattgaaaatggtttttattatgattttgatatggagcct
ttgactgatagagacctgaagaggattaagaaggaaatggatcgaattatcagccgaaac
ttgcctcttgttagagaagaagttagccgggacgaagctcagagaagaataatggctatc
aatgaaccttacaagatagagattttagagagcatacaggaggaaccaattaccatatat
catattggtaatgaatggtgggatctgtgtgcgggacctcatgttgaaactacaggaaag
attaacaaaaaggctgtggagcttgaatctgttgctggtgcttactggagaggagatgta
aagaaaccaatgctccaaagaatttatggcaccgcatgggagaatgaggaccaattaaaa
gcataccttcacttcaaagaagaagctaaacggcgtgatcaccgacgaattggccaagat
cttgatctcttctccatacaggatgaagctggaggaggcttagtgttctggcatcccaag
ggagctatcattaggcacataatagaagatacttggaaaaagattcatatggagcggggc
tacgatttgctctatactccacatgttgcaaaggcagatctttggaagattagtggtcat
ctggacttctacaaagagaatatgtttgatcagatggagattgaggaagagctttttcag
cttcggccaatgaactgcccttatcatgtattgatttataagaggcagttacactcttat
cgagattttccaatcagagttgcagagcttggaacagtgtatagatatgagttatctgga
gccttacatggccttttccgtgtaagaggttttactcaggatgatgcacacatcttctgt
ttagaggatcaaattaaagatgaaatcaggggcgtgttagatctgaccgaggaaatatta
cagcaatttggttttgacaagtatgaggtgaacctttcaacaaggccagaaaaagctgtg
ggagatgatgagatttgggaaaaagcaacatctgcacttaaggatgctttagaagacaaa
ggttggagctatcaaatagatgatggtgggggagccttctatggtcccaagattgatctg
aaaattgaggatgctcttggaaggaagtggcaatgctcaactatacaggttgatttcaat
ttaccccagcgctttgatattacatatgttgattcaaatcaagagaggaagcggcctatc
atgatccatagagcagttcttggatctttggagcggttttttggtgttctcatagagaat
tatgctggtgattttccactttggctttctcccatccaagctcgagttttgccagttact
gatgctcagctccagtactgcaatgaagtgggcaagaaactaaaagctagtggtattcga
gtcgaggtttgcagcggcgagcggctgccaaaactcattaggaatgcagagaagcaaaag
atcccattgatggctgtagttgggcccaaagaggcagaaacacaaactataacggttcga
tctaggttcgcgggggagttagggaacatgtccattgatgaatttatccacagaacaaag
actgctagtgaaagccgtacattcttatga
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