Lycium barbarum (goji berry): 132617039
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Entry
132617039 CDS
T09483
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132617039
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
132617039
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
132617039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
TRM5-TYW2_MTfase
RsmF-B_ferredox
Methyltransf_31
FtsJ
CCSAP
Motif
Other DBs
NCBI-GeneID:
132617039
NCBI-ProteinID:
XP_060187887
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All DBs
Position
11:complement(19790294..19798295)
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AA seq
647 aa
AA seq
DB search
MAGPKLGKKAGSKLGKPPTKKKQKKEPLPPKPVEKEDLFSDGEGTDGDFEGEDGDIGDEE
QQEMNSDSDMSSDVDDPFAADILASGDADDGSDVNSDSDVDSDSDADDTDLVRKSKILDE
ERKREEEDAEAELQLNIKDEADEFRLPTTEELEEETHRPPDLTNLQRRIKEIVRVLSNFK
SLRQEGVTRKDFVDQLKSDLGAYYGYNDFLIESLVEMFPPVELIELIEAFEKPRPISLRT
NTLKTRRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPVGATPEYMAGHYMLQSASSF
LPVMALAPQENERVVDMAAAPGGKTTYVAALMKNSGIIYANEMKESRLKSLTANLHRMGV
TNTIVCNYDGRELPKVLGQNTADRILLDAPCSGTGVISKDESVKTSKTAADIQNCAHLQK
ELILAAIDMVDANSKSGGYLVYSTCSIMVDENEAVIDYALKKRDVKLVPCGLDFGRPGFI
RFRQHRFHTSLDKTRRFYPHVHNMDGFFVAKLKKMSNSKSAAKSSAQSEEIQEADTVESS
DQQNAEGDDEHSEQKAIVKENGKLNEKVEANKKRKRDTQMHSDKKGFGQKGRVTKNGRAE
NQSVATKRREKKKPPPREEIAKAREEKRNALREEKRKAMMKKKAGNK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcccaaactcggtaaaaaagcaggttcaaaattagggaaaccccccaccaag
aagaagcaaaagaaggaacctttgccacctaagccagtggaaaaggaggatctttttagt
gacggtgaaggaacggatggggattttgaaggagaagatggagatattggtgatgaagaa
caacaggaaatgaactcagattctgatatgtcttctgacgtggatgacccctttgctgct
gatatattagcaagcggtgatgctgatgatggttcagatgttaattcagattcggatgta
gattctgattcagatgcagatgatactgatcttgtaaggaagtcaaaaattcttgacgag
gaaaggaaaagagaagaggaggacgctgaagcagaattgcagctcaatattaaagatgaa
gctgatgagttcagattgccaacaactgaggagctcgaagaagaaacacatagacccccg
gatctaactaatctccaaaggaggataaaagagattgttcgagtgctttctaatttcaag
tcattgaggcaagaaggtgtgacacgtaaggattttgttgatcaacttaaaagcgacttg
ggtgcatattatggatacaatgattttctgattgaatcgttagtggagatgtttccccct
gttgagctgattgaacttattgaagcatttgaaaagccccggccgatttctctgcggaca
aacactttaaagactcgcagacgggatttagctggtgttcttcttaacagaggggtcaat
ttggatccattaagcaaatggtcaaaggttgggttagttgtatatgattctcaagttcca
gttggtgccactcctgagtatatggctggtcattacatgctccaaagtgcgagttctttt
ctgcccgtaatggcccttgcccctcaggagaatgaacgtgttgttgatatggctgctgct
cctggaggcaaaacaacttatgttgctgcactgatgaaaaatagtggtattatttatgca
aatgagatgaaggagtcaagacttaaatcactcactgctaatttacatcgcatgggggta
acaaacaccattgtctgtaactatgatggaagagagctgcctaaagttttgggtcagaac
actgctgataggattttgctggatgctccctgcagtggcactggggtgatctcgaaggac
gagtctgttaaaacttccaaaactgctgctgatatacaaaactgtgcacatctgcagaag
gaactgatacttgcagcaattgacatggtcgatgccaactcaaaatcaggtggatactta
gtgtattctacctgctccattatggttgatgagaatgaagcagttatagactatgcactc
aagaaaagagatgttaaacttgtgccatgtggacttgattttgggaggcctggattcatt
cgctttaggcagcaccgtttccatacatctttggacaagacaaggcgattctatcctcat
gtgcacaacatggatggattctttgtggcaaagttgaaaaagatgagcaattccaagtct
gctgcaaaatcgtcggctcagtctgaagaaatacaagaagctgataccgttgagagcagt
gaccagcagaatgctgaaggggatgacgagcattcagagcaaaaagccattgtaaaagaa
aatgggaaattgaatgaaaaagtagaggctaataaaaagaggaagagagatactcaaatg
cattcagataaaaaaggttttggacaaaaagggcgtgtaactaaaaatggaagggcagaa
aaccaatcagtggcaacaaaaaggagggaaaagaagaaaccccctcctagagaggaaatt
gcaaaagctagggaagagaagagaaatgctcttagggaagaaaagcgaaaagccatgatg
aagaaaaaagctggaaacaaatga
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