Lycium barbarum (goji berry): 132617058
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Entry
132617058 CDS
T09483
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132617058
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lbb04147
]
132617058
Membrane trafficking [BR:
lbb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132617058
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132617058
Exosomal proteins of bladder cancer cells
132617058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Fis1_TPR_C
zf-CHCC
Aa-Ago_N
Zn_ribbon_19
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
132617058
NCBI-ProteinID:
XP_060187914
LinkDB
All DBs
Position
11:complement(55101266..55111685)
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSQRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHPRQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFSVSGDSLFYVKDRFLRVYEYSTQKDTQLIPIRRPG
SNNVNQGPRTLSYSPTENAVLICSDTDGGSYELYIVPKDSYGRGDTVQDAKRGTGGSAVF
VARNRFAVLEKSTNQVLVKNLRNEIVKKSLLPMATDAIFYAGTGNLLCRAEDRVVIFDLQ
QRIILGDLQTSFIRYVVWSPDMESVALLSKHSIVIADKKLAHRCTLHETIRVKSGAWDDN
GVFIYTTLTHIKYCLPNGDCGIVKTLDVPVYITKIYGNTIFCLDRDGKNRPIIIDSTEYV
FKLCLFRKRYDQVMSMIRNSELCGQAMISYLQQKGFPEVALHFVKDERTRFNLALESGNI
EIALESAKKIDEKDNWYRLGVEALRQGNAGIVEYAYQKMKNFERLSFLYLITGNVEKLSK
MMKIAEVKNEVMGQFHDALYLGDVRERVKILENAGHLPLAYITAAVHGLNDTAERLAEEL
GDNVPSLPKGKEPSLLMPPTPILGGGDWPLLMVTKGIFEGGLDIAGRGGQEEYEEAADAD
WGESLDIGEVENLQNGDISMVLGDEEGQEGNDDEEGGWDLEDLDLPPDTDTPKATSNARS
SVFVTPTPGMPVSQIWVQKSSLAAEHAAAGNFDTAMRLLNRQLGIRNFSPLKPLFIDLHV
GSHTHLLAFSSAPVITVAIERGWTESASPNVRGPPALIFDFAQLEEKLKAAYKATTGGKF
SDALRLFLSILHTIPLIVVESRQEVDEVKELIVIVKEYVLGLQMELKRKELKDNPVRQQE
LAAYFTHCNLQLPHLRLALQNAMSICYKAGNLSTAANFARRLLETNPTNESQARTARQVL
QAAEKNMRDVSQLNYDFRNPFTVCGATYVPIYRGQKDVTCPYCGTHFVTSQQGELCTVCD
LAVVGADASGLLCSASQIR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagttcgagacgaagagtaatagagttaaagggttgagttttcatagccaa
aggccatggatcttagccagtcttcatagcggtgtgattcagttatgggattaccgtatg
ggaactctcattgatcgctttgatgaacacgatggccccgttcgcggtgttcattttcac
aaatctcaacctctctttgtttctggaggagatgattacaagattaaggtttggaactat
aagctgcatcggtgcttgtttaccctgcttggacatcttgattatatccgaactgttcaa
tttcaccatgaatatccatggattgttagtgcaagtgacgaccagactattcggatatgg
aactggcagtctcgtacttgtatttctgtcttgactggccacaatcattatgtaatgtgc
gcctcatttcatcccaaagaggacctggttgtctctgcttctttggatcagactgttcgt
gtctgggatattggtgccctaagaaagaaaaccgtttctcccgctgatgatatcttgcgg
ttgagtcagatgaatactgatttctttggtggagtggatgctgtggtgaagtatgtcttg
gagggtcatgatagaggggttaactgggcatcgtttcatcctacactcccccttatagtt
tctggtgcagatgatcgccaagtgaaaatttggcgtatgaatgatacaaaggcttgggag
gtggacacattgagaggccacatgaacaatgtttcatgtgttctgttccatccaaggcaa
gatattattgtttcaaattcagaggataagagcattcgagtgtgggatgcaacaaaaagg
actggtcttcagacttttcgcagggagcatgacaggttttggatccttgcatctcatcct
gagatgaatcttctagcagctggtcatgacagtgggatgatagtattcaagttggagaga
gaacgtcctgctttttctgtgagcggtgattctctgttttatgtaaaggatcgctttctc
cgtgtgtatgagtactcaactcagaaggacacacagttgataccaattagaaggcccggt
tcaaacaatgtgaatcaaggtccacgaacactttcatatagtcctacagaaaatgctgtc
ttgatatgttcagacacggatggtggttcctatgaactttacattgtacctaaagatagt
tatggtaggggtgatactgttcaagatgcaaagagaggtaccggaggatcagctgtgttt
gttgcccgaaacaggtttgcggtgcttgagaagagcactaatcaagtcctggtcaaaaat
ctcaggaatgaaattgtcaagaaaagccttcttcctatggctactgatgcgatattttat
gctggcactggaaacttactatgtagggcagaggatagagttgtcatttttgatctccag
cagagaattattcttggggatcttcagacttctttcatcaggtatgttgtttggtcacct
gatatggaaagtgtcgctttgcttagcaagcattccatagttatagctgataagaagctt
gcgcaccgttgcacccttcatgagacaattcgtgtcaagagcggtgcctgggatgacaat
ggggtattcatatataccacacttacccacattaagtactgtctccccaatggggattgt
ggaatcgtcaaaaccctagatgttcctgtctatattacaaaaatatatgggaacactatc
ttttgcttggatcgagatggcaaaaaccgtcctattattattgattcaactgaatatgtt
ttcaagttgtgtctgtttagaaagagatacgatcaagttatgagtatgataagaaactca
gagctctgtggtcaggccatgatttcatatttgcagcagaagggttttccagaagttgct
cttcattttgtgaaggatgagcgcactcgtttcaacttagcacttgaaagtgggaatatt
gagatagctcttgaatctgctaagaagattgatgaaaaagataattggtataggcttggc
gtggaagcccttcggcagggcaatgcaggtattgttgaatatgcctaccagaagatgaag
aattttgagaggctgtctttcctatatctaataacaggaaacgtggaaaagttatctaaa
atgatgaaaattgctgaggtaaaaaatgaagtaatgggtcaattccatgatgccttgtac
ctcggtgatgtccgtgagcgtgttaaaattttggaaaatgctggtcatctgcctcttgca
tacatcacagctgcagtccacgggctcaatgatactgctgagcgtcttgcagaggaactg
ggggataatgttccatcattgccaaaggggaaggaaccttcactgttgatgcccccaact
cccatcttgggtggtggagactggcccttgttgatggttacaaaagggatatttgagggt
ggtttggatattgcaggcaggggagggcaagaggaatatgaagaggctgcggatgcagac
tggggcgagtcattggacattggtgaggtggaaaatctgcagaatggggacatcagtatg
gtgcttggtgatgaggaagggcaagaaggaaatgatgatgaggagggaggatgggatctt
gaggatctggatttgccacctgatactgacacaccaaaggctacttccaatgcgcgctct
tctgtgtttgtcaccccaacacctggcatgcctgtgagccagatttgggtccaaaaatca
tctctagctgctgaacatgcagctgctggaaattttgacactgctatgcggttgttgaac
cgacaactaggtattaggaacttttctcctttaaaaccattgtttattgatcttcatgtg
ggaagccacactcatctgcttgccttctcctcggcgccggtcatcactgtggcaattgag
agaggctggactgagtcagctagtcctaatgttcggggtccacctgctcttatattcgat
tttgctcagttggaggaaaaacttaaagctgcttataaggcgacaaccggtgggaaattt
tctgatgcccttagactattcctgagcatccttcacaccattccgttgattgtggttgag
tcgagacaagaagtggatgaggtcaaggagttgattgtcatagtgaaagagtatgttttg
ggtttgcagatggagcttaagaggaaggaattgaaagataatcctgttcgtcagcaggag
ctggcagcctatttcactcactgtaatctacagcttcctcacttgagactcgcattacag
aatgctatgtctatctgctacaaggcaggaaatcttagcaccgcagccaactttgctagg
agactcttggagaccaatcccaccaatgaaagccaagccagaacagcccgccaggttctg
caggcagctgagaaaaatatgcgagatgtttcacagttgaactatgatttcagaaatccc
tttacagtctgtggggcaacatatgtcccgatataccggggtcagaaggatgtcacttgt
ccttactgtggtacacattttgtaacatctcagcaaggggagctctgtactgtttgtgat
cttgcagttgttggagctgatgcctctggcttactttgctcggcatcacagatcaggtga
DBGET
integrated database retrieval system
