Lycium barbarum (goji berry): 132617078
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Entry
132617078 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132617078
KO
K15082
DNA repair protein RAD7
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132617078
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
132617078
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_At1g61320_AtMIF1
LRR_NXF1-5
PRP21_like_P
Motif
Other DBs
NCBI-GeneID:
132617078
NCBI-ProteinID:
XP_060187949
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Position
11:complement(34502911..34512179)
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AA seq
873 aa
AA seq
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MTLMRSREVSLATKPKISSKTLENGVLEPATPSKSLETSVQPLCDVTPTSPTSASPDIPR
VARRRSLRLASKTGLSEVGENLSHKGKSKDFEIDNAKSLKNAFGIESSALDEDKGLEVLH
SEEVEEISQNESDDIGNLAQYVKEGKGEKRASMEVQVEGDTKFLSLRSGKKISKRAVEEN
SGGSVGKIGNVQSGCDEKLSQGKLSEGMSNSCVSVEPSSVKRRRFSREEKCKDTVSEQGL
SVIHSVKLESEVAFEMPIEQTVPQSACLSETVDLAVQGDGQAAILKNGPSKTRRKLSREE
KGKKVMGVDDLRHGIDTLEVKSEHGAEVLVDDIVSGAINLSENRTIQDGTQAADTDGSLT
ATRRVHRDRFRDIARRNASRFAHFSSQEEQEINVADEASEEIPQEVVVTEEIEDWPGPFS
TAMKIIRDRETNNKHQQQSKSEKSKIEVVWVPKKDQQCQSTTLVVPSLQDLCMGILVNNA
DAITSLDCVPDALRHRICQSLCDSRKMTYQFFELLIRGSPTEIRIRDCSWLNEEKFTQSF
EGCDTSNLVVLQLDQCGRCMPDYILLATLARWPNNLPALTTLSLKGACRLSDTGLTAIIS
AAPNLRSMNLSQCSLLTCDGISCLSNSLGSVLRELYLDDCEAIDPMLILPALLKLEHLEV
LSLAGIQTVCDAFIKEFVTHRGQSLREIVLKGCMELTDCSLKEISQNCPGLRAIDLSDLR
KLTDSAVGHLATGCRAVDKLKLYRNAFSDEAVAAYVETSGESLKELSLNCVNKVSHNTAI
SLAKCSKNLISLDLSWCRNLTNDALGLIVDNCLSLEVLKLFGCTQITSVFLDGHSNPQVQ
IIGLQFTPILQHIEAPDSLQQGPLRYSAVPSLF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgacacttatgaggtctcgcgaggtttctctggcaaccaagcctaaaatctcttcaaaa
accctagaaaatggtgtattggaaccggcaactccatcgaaatctcttgagacttcagtc
cagcctttatgtgacgtgactccgacttctcctacttcagctagtcctgatattcctcgt
gttgctagaaggaggagtttgagattggcttctaaaaccggtttgagtgaagttggcgaa
aatttgagtcataaaggaaagagtaaggattttgaaattgataatgcgaagagtttgaaa
aatgcttttggtatagaaagctcggctttggatgaagataagggtttagaggtgttacat
agtgaagaagttgaagaaataagtcagaatgaatctgatgatataggaaatttagctcaa
tatgttaaagaggggaaaggggagaaaagggcgagtatggaagtgcaggtagaaggggac
actaagtttttgagtttgcggtctggcaagaaaatctcgaagagagcagttgaagaaaac
agtggtggctccgttggcaagattggaaatgttcagagtggttgtgatgagaagttgtct
caaggaaagctaagtgaaggaatgtcaaacagttgcgtttcagttgagccttctagtgtt
aagaggaggaggttcagtagagaagagaaatgtaaagacacagtttctgaacagggtttg
tcagtgattcattcggtgaaattggaatcagaggtagcattcgagatgccaattgagcag
acagtacctcagtctgcttgtttgtcagaaaccgtagatctggctgttcagggtgatggg
caagctgccattttaaaaaatggtccttcaaagacaagaaggaagcttagcagagaggaa
aaaggaaaaaaggtgatgggggtcgatgatttgcgtcatggtattgatacattggaagta
aaatccgagcatggggcggaggtacttgtcgatgatatcgtttcaggagctataaattta
tcagagaataggacaattcaggatggaactcaagctgcagataccgatggcagtctaact
gctacaagaagagttcatagagacaggtttagggatattgctagacgaaatgcttccagg
tttgctcatttctcttcccaagaggaacaggagatcaatgtcgctgatgaggcttctgag
gaaattccacaggaggtagtggtcactgaagaaatagaagactggcccggtccattttca
actgctatgaagattattagagatcgtgaaacaaacaacaagcatcagcagcagagtaaa
tctgagaaaagtaagattgaagtggtatgggttcccaaaaaggaccagcagtgccaatct
acaacgctggtggttccctcactacaagacctatgcatgggcattttagtgaataatgca
gatgcaatcacttcacttgattgtgtacctgatgcactcaggcacaggatttgccagtca
ctgtgcgactctcggaaaatgacgtatcaattttttgaacttcttatccgtggatctcct
acagagatacgcataagggattgttcatggttgaacgaggagaagttcacacagagcttt
gaaggatgcgacaccagcaacttggtggtgcttcaactggatcagtgtggtcgctgtatg
ccagattatatcctattggctacattagctcgttggccaaacaatcttcctgcattgacg
actttatccttgaaaggtgcatgtcgtctttcggataccgggcttacggcgatcatctct
gcagcacctaatttaaggtcaatgaatctcagccaatgctctttgctgacatgtgatggg
attagctgtttatctaattcattgggatcagttctgagagagttatatctagacgattgc
gaagcaatagatcccatgcttattcttccagcattactaaagctagaacatctggaagtt
ctatcactagctggaatccagactgtatgtgatgcttttattaaagaatttgtcactcat
cgaggtcagagtctgagagagattgttctgaagggatgcatggaattgactgactgttct
ctgaaagagatttcacaaaactgtcctggattacgcgctatagacctgagtgacttgcgt
aaattgacagactctgcagttggacatcttgccactggttgtagagcagttgacaagcta
aaactatatcgcaatgcattcagtgatgaagctgttgctgcttatgtggaaactagtggc
gagtctttgaaggaactgtctctcaattgtgtcaataaggtttcacacaacactgcaatc
tctctagccaaatgctcaaaaaatctgattagtctggatttgtcttggtgccgcaacttg
acaaatgatgccctgggattgattgttgataactgcttgtcattggaagtactaaaatta
tttggctgtactcagattactagtgttttcctggacgggcactcaaatccccaagttcag
atcattggattgcaatttactccaatactacagcacattgaggcacccgattctttgcag
caggggccgctacgatattcagcagtaccatctttattctga
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