Lycium barbarum (goji berry): 132617245
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Entry
132617245 CDS
T09483
Name
(RefSeq) solanesyl diphosphate synthase 1, chloroplastic-like
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00900
Terpenoid backbone biosynthesis
lbb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132617245
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lbb01006
]
132617245
Enzymes [BR:
lbb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
132617245
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
132617245
Prenyltransferases [BR:
lbb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
132617245
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
132617245
NCBI-ProteinID:
XP_060188199
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All DBs
Position
11:7962591..7967820
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AA seq
403 aa
AA seq
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MMSVTCHNLEIGRTPLDFVACGCSSNAASVNRISKGILRNVNRGGFNGRKMLSCRQFSTK
ASLTGVAPVLDLNKSAKPISLTNVFEVVADDLLILNKNLQNIVGADNPVLMSAAEQIFSA
GGKRVRPALVFLVSRATAAISALKELTTEHRRLAEIIEMIHTASLIHDDVLDESDIRRGK
ETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASNLFDC
DVGLEEYLLKSYYKTASLIAASTKGAAIFSSVGSDTSEQMFQYGKNLGLSFQIVDDILDF
TQSAEQLGKPAGSDLVKGNLTAPVLFALEEEPKLRNIIESEFHDAGSLEEAIKLVKTSGG
IQRAQDLAKEKADLALQSLKCLPSSPFRAALEEIVKYNLERIE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgttacttgccataatcttgaaattgggagaactccattggattttgttgct
tgtgggtgctcttctaatgctgcttcagttaacaggatttcaaagggtattttaaggaat
gtaaatagaggaggattcaatggtcggaaaatgttgtcttgcagacagttctcaactaag
gcttcacttactggggtggcgccagtattggatttgaataagtcagcaaaacctatttca
ctgactaatgtttttgaagtggttgctgatgacctcctaatactaaacaagaacttgcag
aatattgttggtgcagacaatccagttttgatgtctgcagctgagcagatttttagtgct
ggtggcaaaagggtgagacctgctctagtgttcctagtctcaagggccacagcagcaatt
tctgccttaaaggaactcaccacagaacacagacggttagctgaaatcattgaaatgatc
catactgcaagcttaatacatgatgacgtgttagatgaaagtgatatacgaagaggaaaa
gagactgttcaccaattatatggtactagagtagcagtactggctggtgattttatgttt
gcacagtcgtcctggtacctagctaaccttgaaaaccttgaagtcataaagctcatcagt
caggttattaaagactttgcaagcggtgaaataaaacaggcctctaatttgtttgactgt
gatgttggactggaggaatatttgctgaagagttactataaaacggcatccttgattgct
gcaagcactaaaggagctgccattttcagcagtgttggcagtgatacaagtgaacagatg
ttccaatatgggaagaatcttggtttatcattccagattgtcgatgacatattggatttc
actcaatcagcagaacaattgggaaagccagctggaagtgacttggtcaagggaaacctt
actgcaccagtactctttgcattagaggaagagccaaaacttaggaatataatcgaatca
gaatttcacgatgctggttctcttgaggaggctattaaactggtcaagaccagcggggga
attcagcgggcacaagatttggcaaaggagaaagctgatttagcactgcagagcttaaaa
tgccttccatctagtcctttccgagcagcacttgaggaaattgtgaagtataatctggag
agaattgaatag
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