Lycium barbarum (goji berry): 132617334
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Entry
132617334 CDS
T09483
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132617334
Enzymes [BR:
lbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132617334
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
90S particles
Helicases
132617334
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
FTA4
Helicase_C_2
SKIP_SNW
CCDC71L
Motif
Other DBs
NCBI-GeneID:
132617334
NCBI-ProteinID:
XP_060188302
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All DBs
Position
11:3636404..3643009
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AA seq
748 aa
AA seq
DB search
MRNHAPKSRKAKIQNRLSEVQEIELLEAWIESGKPESGSNPLSFDPLPHKAPVGRLPDGS
FSKYTGCDSFSQLPVSKKTKDGLTQCKYKTMTDIQRASIPHSLCGRDILGAAKTGSGKTL
AFVIPVLEKLYKARWGPEDGVGCIIMSPTRELAGQLFEVLKSVGKHHGFSAGLLIGGRKD
VDAEKEHVNGLNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKDLNAII
SQLPKHRQTLLFSATQTKSVQDLARLSLKDPEYLGVHEESDTATPNRLQQTAMLVPLDKK
LDMLWSFIKAHLNSRILVFLSSCKQVKFVFETFKKLRPGIPLKCLHGRMKQDRRMGIYSQ
FCEQRSVLFSTDVASRGLDFNKAVDWVVQVDCPEDCAAYIHRVGRTARYLSGGRSVLFVM
PSEMKMLEKLEEKKIPLRVIKANEKRIQSVSGLLASLLVKYPELQHLAQRAFVTYLKSIH
KQRDKEIFDVTKLPIDEYSASLGLPMTPKIRFLKQKLKGKTVSEALSLIPEDTSNENLLE
FPVKKLDTGKSDVEEVEEEDLLLAKETQEAGEKINSKGDDMLATRVTKKKKLKINVHRPV
GTRVVFDEEGNTLPPLARLAATSSDADSVQLNKEKVNQRYAELRKNLKVADKEDKDLDKK
RRKEKRIKEKMKSKRGREEEEEQDEDVSGSDTEIPRGRVDKKTKIYFDSDDEDGERTADK
AKEGIAADSISLAEQEELALKLLNSMHS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatcacgcgcctaaatcacgtaaagctaaaatacagaaccgtttatccgaagtt
caagaaattgagcttctagaagcatggatagaatcgggtaaacccgaatccggttcaaac
ccgttatcatttgacccattaccacataaagctccagttggacgcttacctgatggttca
ttctctaagtatactggttgtgatagttttagccaattgcctgtttctaagaaaactaaa
gatgggttaactcagtgtaaatataaaactatgactgatattcaaagggcttcgatccca
cattctctttgtgggagagatattcttggcgccgcgaaaactggttcaggaaagacattg
gcttttgttattccggtgctagagaaattgtataaagctcgatggggaccagaggacggt
gttggatgcatcataatgtctcccacaagggagttagcaggtcaactttttgaagtactt
aaatctgttgggaagcatcatggatttagtgctggccttctgattggtggccgcaaagat
gtcgacgccgaaaaagagcatgttaatgggctgaacatcctggtctgcacccctggccgg
cttcttcagcatatggatgagacaccaaattttgattgttcacaacttcaggttttagtt
cttgatgaagcagatcgtattcttgatgtggggtttaagaaggacttgaatgcaatcatt
tcacaattgcctaaacataggcagaccttattgttttcagcaacccagacgaagtccgtt
caagatctggcaaggctcagtctgaaagatcctgaatatttgggtgtacacgaggagtct
gatactgcaactcccaaccgcttgcaacaaacagcaatgcttgttcctcttgataagaaa
ttggacatgttatggagttttataaaggcacatcttaattcaaggatattggttttctta
tcaagctgcaagcaggtaaaatttgtttttgaaactttcaaaaaactccgtcctgggatt
ccactcaaatgtcttcatgggaggatgaagcaagatagaaggatgggaatttactcccaa
ttttgtgaacaacgttctgttctgttctccactgatgttgcttcgagggggcttgatttt
aataaggcggttgattgggttgtccaggtggactgtcctgaagattgtgctgcttacata
cacagagttggccgcactgctcgttacctttcagggggaagatctgttttattcgtgatg
ccatctgaaatgaaaatgcttgaaaagttggaagagaaaaagataccccttcgagttatc
aaggcaaatgaaaagaggatacagtctgtctctggcctacttgcttctttattggtcaag
taccctgagctacagcatctggctcaaagggcttttgtgacatatttgaagtccatacac
aaacagagagataaagagatttttgatgttacaaaacttccaattgatgaatactctgct
tcattgggtcttcctatgacccccaaaatccgatttctgaaacagaaactcaaagggaag
acagtgtctgaagcattatctctcataccagaggacacgagcaatgagaatttgttggaa
tttccagttaagaagctagatacaggtaaatcagatgtagaggaagtggaggaagaagac
ctccttctagctaaggagacacaagaagccggagaaaagattaacagcaaaggagatgat
atgctggccactagagttacgaagaaaaagaaactaaagatcaatgtccacagaccagtc
gggacaagggttgtgtttgacgaggaagggaacactttacctcctcttgcaagattagca
gccacaagcagtgatgctgactctgttcagcttaacaaagaaaaagtaaaccagagatat
gctgagttgagaaagaacttgaaggtggccgacaaggaagacaaggatttggacaagaaa
cgtcgcaaagaaaaacgaatcaaggagaagatgaagtctaagagagggagagaggaggaa
gaagaacaagatgaagacgtgtctgggtcagacacggaaatcccgcgaggtagagttgac
aagaaaacgaagatctatttcgacagtgatgatgaagatggcgagaggacagcggacaag
gctaaagagggtattgctgctgattccatatctttggcagagcaggaagaactggctctg
aagctgctaaattccatgcactcttaa
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