KEGG T09483: 132617654

Lycium barbarum (goji berry): 132617654

Entry

132617654         CDS       T09483

Name

(RefSeq) probable E3 ubiquitin-protein ligase ZFP1

K19041

E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]

Organism

lbb Lycium barbarum (goji berry)

Brite

KEGG Orthology (KO) [BR:lbb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lbb04121]
    132617654
Enzymes [BR:lbb01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132617654
Ubiquitin system [BR:lbb04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132617654

SSDB

Motif

Pfam:

zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_5 zf-RING_11 zf-C3HC4_3 zf_RING_Vps8 zf-RING_UBOX zf-ANAPC11 zf-RING_16 zinc_ribbon_16 zf-RING_Vps41

Other DBs

NCBI-GeneID:

132617654

NCBI-ProteinID:

XP_060188686

LinkDB

Position

11:6751561..6766803

AA seq 387 aa
MVRRSMSDNNHIINVGADPRNQEYIHPEPCVVYGSFTSFPHPNVHTVIPSAGNTGNFYLH
HLPNHQEGAVIYGMPPSNGVQQPHPATNVAVFATSSNHYNPYVAAPSTDFLAPVNHGLHN
SWAWNQAAPSPYLPGGAGGYVDAGFMGVQGYQLTASNGGLNSFLHAPPNMQYMGGHTMSF
SPQMTASSRVYLQNSSSNNSNNLLRGVVPFSPTGSRLYRPHPREFMPEANTRHHNLPNMR
VLPENRVAMLDVPAYHEVGNVVDQFRDMRLDIDHMSYEELLALGEHIGNVTTGLSEEAIV
TNLKTRIFLSTETPCALESVACQDHKTDCVICQTGYIDQDKIGVLECGHEHHEDCIKKWL
VVKNICPICKSTALSTKKQVDGRSMNN

NT seq 1164 nt +upstreamnt +downstreamnt
atggtgcgaaggagtatgtcagacaataatcacataattaatgtgggagcagatccgcgg
aatcaagagtatatccatccagagccttgtgtggtgtatgggagctttacatcttttcca
catccaaatgtccacactgtaataccatctgcaggaaacactggaaatttctatttgcac
catctaccaaaccatcaagagggcgctgtaatttatgggatgccaccgtccaatggggtt
caacagccgcatcctgccaccaatgttgcagtatttgcaacatcatcaaatcactataac
ccttatgtggctgctccatctacagattttctagctccagtaaatcatgggttacataat
tcatgggcctggaatcaggctgctccttcaccctatcttcccggtggtgccggaggctat
gtagatgctggatttatgggtgtgcaaggttatcaattaactgccagcaatggaggtttg
aatagttttctgcatgcaccgcctaatatgcaatatatgggaggccacactatgagcttc
tctccacagatgacagcatcttcacgcgtctacctgcaaaatagctcgtccaataactct
aataatctattgcgaggtgttgtaccattctcaccgactggctctaggttgtacagacct
catccaagggaattcatgcctgaagcaaatactcgacaccacaacctccctaacatgaga
gttttgccagaaaatagggtggcaatgctggatgttccagcataccatgaagtgggtaat
gttgttgatcagttcagagatatgcgtttggacatagatcacatgtcttatgaggagctt
cttgcattgggggagcatattggcaacgtgacaacgggtttatcagaggaagctattgtc
accaatttgaaaacgagaatatttttgtctaccgagactccttgcgctctggaaagtgtt
gcatgtcaagatcacaaaactgactgtgtcatatgccagactggttacatcgaccaagat
aagattggcgttcttgagtgcgggcacgagcatcatgaagactgcataaagaaatggttg
gttgtgaagaatatttgccccatctgcaaatccacagcattgtccacaaagaaacaggta
gatgggaggtcgatgaataattaa

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