Lycium barbarum (goji berry): 132617850
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Entry
132617850 CDS
T09483
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Module
lbb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132617850
Enzymes [BR:
lbb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
132617850
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
132617850
NCBI-ProteinID:
XP_060188905
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Position
11:complement(26874116..26877813)
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AA seq
403 aa
AA seq
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MKYNIKVSFALLLLFLARLGDAQAPTSQPAVFDITKYGATSNGDISKAVLDAFKEACAST
SPSTIVIPKGTFQMAQVKLQGPCKAPLELQVQATLEANEDPKQLSADIEWLTVNYIDRFT
LSGGGTFDGQGKAAWAQNNCKDSKSCGNLPNNLSFNFLTNSTIQDITSQDSKLFHVNVNG
CKNLTFIRVNITAPPESINTDGIHVARSSNVNITDCIIGTGDDCISVGDELEQLHITRVT
CGPGHGISVGSLGKTSGEKPVVGVYVRNCTFINTDNGVRVKTWPASHQGVVTDLHYEDII
VQNVTNPIVIDQVYCPYNQCNKDLPSQVKISKVSIKNVRGTSRTQDAVLLLCSKGVPCEG
VEVGDIDIAYNGKEGPAKSRCENVKPTLVGKQNPPVCAGAQSA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataatatcaaggtatcatttgcacttctattgctatttttagcaagacttgga
gacgctcaggcaccaacatctcagccagcagtgtttgatattactaaatatggcgcaact
agtaatggagatatcagtaaggcagtgttggatgcttttaaagaggcatgtgcatcaaca
agcccaagtacaatagtgataccaaaaggcacatttcaaatggctcaagtgaaactacaa
ggtccatgcaaggcacctcttgaacttcaagtccaagccactttggaagctaatgaagat
cctaaacaactcagtgctgacattgaatggctgactgttaattatattgatcgttttaca
ctctctggcggtggtacttttgatggccaaggtaaagcagcatgggctcaaaataattgc
aaggattccaaaagttgtggcaatcttcccaataatttgagcttcaacttccttacaaat
tccacaatccaagacataacatcacaagacagcaaactcttccatgtcaacgtgaacggt
tgcaagaacttgacattcatccgagttaacatcacagctccaccagaaagcatcaacacc
gatggcatccacgtggcacgatcgagcaacgtaaacatcacggattgtatcattggcact
ggagatgactgtatttctgttggtgatgaattggaacaacttcatatcactagagttact
tgtggacctggacatggtattagtgttggaagccttggaaagacttctggtgaaaagcct
gtggtgggagtttatgtgaggaattgcacatttattaatactgataatggtgttagggta
aagacatggccagcttctcatcaaggtgttgtcacggatttgcactatgaagatatcatt
gtacaaaatgttaccaaccctattgtcattgatcaagtctattgcccatacaatcagtgc
aacaaagatttgccatcacaagtgaagataagcaaagtgagcataaaaaatgtaaggggt
acatcaagaacacaagatgcagtgctgctactgtgcagtaaaggagtaccatgtgaagga
gttgaagttggagacatagacattgcctacaatggaaaggaaggaccagctaagtctagg
tgtgagaatgtcaagccaactcttgtggggaagcaaaatccaccagtttgtgctggagct
cagtctgcttga
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