Lycium barbarum (goji berry): 132617874
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Entry
132617874 CDS
T09483
Name
(RefSeq) LOW QUALITY PROTEIN: plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132617874
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
132617874
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
132617874
NCBI-ProteinID:
XP_060188927
LinkDB
All DBs
Position
11:120915244..120922029
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AA seq
532 aa
AA seq
DB search
MDNPNSRPCQNCNKRTIVADDHTGNPVCRSCGIIQTFDNYDPQIGGLTGPTGTYVHTGTS
GIGNKYNYKETKIYEAKRIINDITFQLQFSPSKCSEVEVMVKKITVGEYGKGKWFEIFVG
ACCYVVFRQDNKPLSIVKVASLVRCDIYELGRMVYRVVEFLELELPQIDVVGSFEYYVKD
VECFSEVDEDVITRMLKQGFFLVNCLVKWYVTTGRRPLPVVGSVLVFVAELNGVDVRIED
VADELGVEVVTCKLRYKELLERLVKVARGLPWGEDVTVKNIMKHATFVIQYMELKSMSKL
KNSGDGKRKSFEDVGFDLDYLIDDCLSNENDYAIDFNDGENDSRYFRTERASNLSSESPN
RFQISLECLAMVYSKIKNDMYVNESTISRDNSIPRRKRRYGIISVTDWWKGESEMSKMLL
MKELVEKDVGLSAMPPSFDRGCLTYERRKEKIKAAKFRIHKTMYPSDAGSMDKVDVGPVE
HVNAGKKRRRKTKVDVDWEDVIIETLLLHQVKEEEIEKGYYKALLDLHVFNY
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggataatcccaattctcgtccctgccaaaattgcaacaaaaggacaatagttgcagat
gatcatacaggtaatcctgtttgtagatcatgtggaattatccaaacattcgataattat
gatccacaaattggtggtttaactggtcctacaggtacttatgtacatacaggtacatca
ggtattggaaataaatataattataaagaaacaaaaatatatgaagcaaaaagaataatt
aatgatataacctttcaattacaattttctccttcgaaatgtagtgaagttgaagttatg
gttaagaaaattactgttggtgaatatggtaaaggtaaatggtttgaaatatttgttggt
gcttgttgttatgttgtttttagacaagataataagcctttgagtattgttaaggttgct
agtttggttcgttgtgatatttatgagttaggtcgaatggtttatcgagtagttgaattt
ttagaattggagttgcctcagattgatgttgttggttcgtttgagtattatgttaaggat
gtcgagtgttttagtgaggttgacgaggatgttattacgaggatgttgaaacaagggttt
tttttagtgaattgtttggttaagtggtatgttacgacggggaggagaccgttgccggtc
gtggggtcggttttggttttcgttgcggagttgaatggggtggatgtgaggattgaggat
gttgcggatgagttgggagttgaggttgttacgtgtaagttgaggtataaggagttgttg
gagaggttagtgaaggttgcgagaggtttgccttggggtgaggatgttacggttaagaat
attatgaagcatgcaacgtttgtgattcaatatatggagttgaaatcgatgtcgaagttg
aagaatagcggtgatggtaaaaggaagagtttcgaggatgttggatttgatttggattat
ttgatcgatgattgtttgagcaacgaaaacgattacgctatcgattttaatgacggggaa
aacgactcgcggtattttcggacggagcgtgcgtcaaatttgagtagtgaaagtccgaat
agattccagatatctctagagtgtttggcgatggtttattcgaagattaagaatgatatg
tatgtaaacgagtcgactattagcagagataatagcattccgagaaggaagagaagatat
ggcataatttcggtcactgattggtggaagggcgaatcggaaatgagcaaaatgctttta
atgaaggaattagtggagaaagacgtgggattgagtgctatgcctccgtcttttgataga
ggttgtttgacatatgaaaggagaaaagagaagataaaggctgcgaaatttcgaatccat
aagacaatgtatccttcagatgctggatcgatggataaggttgatgtaggccccgttgaa
catgtaaatgctggaaagaaaaggagaaggaaaacgaaagttgatgttgattgggaagat
gtcattattgaaacacttctccttcatcaagtgaaagaagaggagatagagaaggggtat
tataaagccttgttggacttgcatgttttcaactattga
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