KEGG   Lycium barbarum (goji berry): 132617999
Entry
132617999         CDS       T09483                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbb03400]
    132617999
DNA repair and recombination proteins [BR:lbb03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    132617999
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-C3HC4_4 ResIII zf-RING_5 Prok-RING_4 zf-RING_4 RING_XB3-XBAT31 CUE zf-ANAPC11 UBA HBS1_N
Other DBs
NCBI-GeneID: 132617999
NCBI-ProteinID: XP_060189050
LinkDB
Position
11:123357134..123366736
AA seq 1338 aa
MEMEAIVEENESKIKMIRSVIGYEIAEKDILEALLQKNNNLEAAINYLLDFSQLSTVNKT
VTSTGVRISGPINQENGCEMVSGLKVKEEPNVVMEEKKDFDGYGAKRLVGKLDSGCEVVN
GLKVKEKPDVGIEERKDFDGYGAKGLVGKLDLGCEMVNGLKVKDEPDVVMEERKDFDGYG
AKGLVDKWDLDSEMVNGLKVKEKTDVVMEERKDFDGYGAKGLVGKLDLGCEMVNGLKVKD
EPDVGICEKGKSDEKMKVFDGYGAKGSVDKWGLGSEVVNGLKVKDEPDVAICEKGKNDEE
MKVFDGYGAKESAGKSVSGSEMVNGLKVKEEPDVFIDETGENKVHKDVLGGRISKWRRDL
MKEFYEWSELPENNPQPKEEEKLEIVKFKEEEHVLNVKPLSVKPLKSCTNRGILGSKEKT
GIAKNSLSTVVMEDGDFPEESDWLLVGRTVVTGLSTTKGRKLENNEIVHFNFPQLGSSKS
SSHWGGSRAAHAAASSIVRFSTKRSGEIGRLPMEWAKCLIPLVNSSKVKVLGRCVAAPVN
LCLMQELMLYVSFYIHQSVFTSGEKSSWRLDSPSQIDTTTYPLLTLFKLLKVNPFQNAEF
TPDELDSRKRHLNLDSDSNEAASVLSIAKRRRGCQQYSEPNKDEQEIDISEASFNKLVGS
VDMYDLKEMEAPDTLMCSLRPYQKEALYWMTESEKGADVEEASKTLHPCWAAYRICEERK
IYVNIFSGEATTDFPTASKAARGGILADAMGLGKTVMTIALVLAKLGKGSPDDQDFVSED
ADETECITKRITYTDTEVSRKAKGGTLIVCPMALLGQWKDELEAHSKPGSISVFVHYGGD
RSNDPRVIAEQDVVLTTYGVLSATYKADKENSIFHNVDWYRVVLDEAHTIKSWKTLGAQA
AFTLSAHCRWCLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWNKLIQRPYENGDQRALKL
IKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIQCIQSEAERDFYDALFKRSKVQFDQ
FVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRSDTQEFADLDKLARRFLETNPDSSTQ
KAPTPAYVEEVVEGIRNGENTECPICLESADDPVLTPCAHRMCRECLLSSWRTPASGLCP
ICRQMLKKYELVTCPSANRFRIDVDKNWQESSKVSKLMECLESIRKTGEKSIVFSQWTSF
LDLLEIPLKRKKIGYLRFDGKLVQKYRERVLKEFSETNEKTILLMSLKAGGVGLNLTAAS
NVFLMDPWWNPAVEEQAIMRIHRIGQKKTVRVRRFIVKDTVEERMQQVQARKQRMIAGAL
TDEEVRSARLEELKMLFR
NT seq 4017 nt   +upstreamnt  +downstreamnt
atggaaatggaagcaatagttgaagaaaatgagagcaaaatcaagatgatacgttcagta
attggttatgaaattgcagaaaaggacattcttgaagcgcttttacaaaaaaacaacaat
cttgaagcagctattaattatttgcttgatttttcacagttatcgacagttaataaaact
gttacgagtactggggtacgtatatctggtccgataaatcaagaaaatggctgtgaaatg
gttagtgggctaaaagttaaagaggaacccaatgtggttatggaggaaaagaaggatttt
gatggttatggagcaaaacggttagttgggaaattggattctggatgtgaagtggttaat
gggctaaaagttaaagaaaaacctgatgtgggtattgaggaaaggaaggattttgatggt
tatggagcaaaagggttagttggtaaattggatttgggttgtgaaatggttaatggatta
aaagttaaagatgaacctgatgtggttatggaggaaaggaaggattttgatggttatgga
gcaaaagggttagttgataaatgggatttggacagtgaaatggttaatgggttaaaagtt
aaagaaaaaactgatgtggttatggaggaaaggaaggattttgatggttatggagcaaaa
gggttagttggtaaattggatttgggttgtgaaatggttaatgggttaaaagttaaagat
gaacctgatgtgggtatttgtgaaaaaggaaaaagtgatgaaaaaatgaaggtttttgat
ggttatggagcaaaagggtcagttgataaatggggtttgggtagtgaagtggttaatggg
ttaaaagttaaagatgaacctgatgtggctatttgtgaaaaaggaaaaaatgatgaagaa
atgaaggtttttgatggatatggagcaaaagagtcagctggtaaatcggtttcgggcagt
gaaatggttaatgggctaaaagttaaagaagaacctgacgtgtttatcgatgaaacaggt
gaaaacaaggtacataaggatgttcttggtggtcgtatatcgaaatggagacgtgatttg
atgaaagaattctatgaatggtcagagttgcccgaaaacaatccacaaccgaaagaggaa
gagaaacttgaaatagtaaagttcaaagaagaagaacatgtacttaatgttaaaccatta
tcagtaaagccattgaagagttgtactaataggggtattttaggaagtaaagaaaagacc
ggaattgcgaaaaatagtcttagtactgttgtgatggaggatggtgattttcctgaagag
tctgattggttgttagttggaagaactgttgttactgggctttcaactacaaaagggaga
aaattggagaataatgagattgttcattttaattttcctcagcttgggagtagtaaaagt
agttcacattggggtggatcaagagctgctcatgctgccgcttcatccattgttaggttc
tcgactaaacgatcgggagagattgggcgtctcccaatggaatgggcaaaatgcctcatt
ccacttgtaaattcttcaaaggtaaaggttcttggccgatgcgttgctgcgcctgtaaat
ctgtgcctaatgcaggagctcatgttgtatgtaagtttctacattcaccagtcagtgttt
acgagcggtgaaaaatcatcatggaggctggattctccctcacaaattgatacaacaaca
tatccactacttactctgttcaagctactcaaagtcaatccctttcagaatgctgaattc
accccggatgagcttgattctcgtaaacgccatctcaatttagattccgattcaaatgaa
gctgcttcagtgttatcaatagcaaagcgaagaagaggctgccagcagtattcggagcca
aacaaggatgagcaagagatagatatctccgaagcatcttttaacaaacttgttggttct
gtagacatgtatgacttgaaggagatggaggctccagatacacttatgtgcagcctaagg
ccttaccagaaagaagctctttactggatgacagaatcagagaaaggagctgatgtagag
gaagcatcgaaaactcttcatccatgttgggcagcatatcggatatgcgaagagaggaaa
atttatgtcaacattttctcgggggaagcaactaccgacttcccaactgcatcgaaagca
gcacgcggagggatattggcagatgcaatgggtcttggaaagacagtgatgacaattgct
ctagtactcgcaaaactgggcaagggtagccctgatgatcaggattttgtctcagaagac
gcagacgaaactgaatgtataacaaaaagaatcacttatactgatacagaagtatcaaga
aaggcaaaaggtggcactctaattgtctgtcctatggcgttactaggccagtggaaggat
gaacttgaggcacattcaaaacctggtagcatttcagttttcgttcattatggcggggac
agaagtaatgatcctagagtgatagcagaacaagatgtagtgctgacaacgtatggtgtc
ttgagtgcaacttataaggctgataaggagaatagcatatttcataatgttgattggtac
cgggtggttttggatgaggcacacaccatcaaatcctggaagactctgggcgcacaggct
gcctttactttatcagcacattgtaggtggtgtcttactggtacccctcttcagaacaat
ttggaggacctctacagccttttatgtttcttgcacgttgagccatggtgcaactgggca
tggtggaacaagttaatacaacgaccttatgaaaatggtgatcagagagctctaaaattg
atcaaggccattttgaggccactgatgttgaggagaacaaaggataccaaggacaaagaa
ggaaggccgattcttgttctccctccaaccgatattcaagtcattcagtgtatacaatca
gaagctgaacgtgacttctatgacgccctcttcaaaagatctaaagttcaatttgatcag
tttgtggcacaaggaaaagttcttcacaactatgctaacattcttgaattgctactaaga
ttgaggcagtgttgcaaccatcctttccttgtgatgagccgaagtgatacacaagaattt
gctgacttagataagcttgcaagaaggtttttggaaacaaatcctgattcatcaacacag
aaagcacctacaccagcatatgtagaagaagttgttgagggaattcgtaatggcgaaaat
acggaatgtcccatatgccttgagtcagcagatgaccctgtgctaacaccatgtgcccac
agaatgtgcagagaatgccttctttcaagttggagaactccagcaagtggactttgtcca
atttgtaggcaaatgctgaagaaatacgagttagtcacatgtccttctgctaatcggttt
cgaattgatgttgacaagaactggcaagagtcttcaaaggtctcaaagttgatggaatgc
ttggagtctataagaaaaactggtgaaaaaagcattgtttttagccaatggacctcattt
cttgatcttttggagattccacttaagagaaagaaaattggatacttgaggtttgatgga
aagttggtgcagaaatatagagaaagggtcttgaaagagttcagtgagactaatgagaaa
acaattttgttaatgtcactaaaggctggaggtgtgggcttgaacttaacagcagcttct
aatgtctttctcatggatccatggtggaatcctgcagttgaggagcaagcaataatgaga
attcatcgtattggtcaaaagaaaacagttcgtgttagaaggttcattgttaaggacaca
gtggaagaaagaatgcaacaagtccaagcaagaaagcaaaggatgatagctggagctttg
actgatgaagaagtgaggtctgccagacttgaagaactcaagatgctcttcagataa

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