Lycium barbarum (goji berry): 132618092
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Entry
132618092 CDS
T09483
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lbb03036
]
132618092
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
132618092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
PDS5
PHD
Tat
PHD_2
zf-PHD-like
IFRD
Motif
Other DBs
NCBI-GeneID:
132618092
NCBI-ProteinID:
XP_060189126
LinkDB
All DBs
Position
11:complement(79106396..79132893)
Genome browser
AA seq
1786 aa
AA seq
DB search
MANTSSSSGVPQGLISLSNTVHSEIAPSLPLASLPVFCGAVDQDLRLFDDYERRSNKSSR
SLNNRSDVLGHAAKIADLLHNTDVSYLNLRADASPQPCGFVGHLDLHNEVLRCNSEAFAL
INAGPIKETARNRKADSSPLESIPAVQLPRQGTVEINNYQHDHITSDVTASSRKPKVKKK
GRADTLLSSGPDASECQDAVVAGFCEMLEDFCGRAEMFSDERDEREFLPMSAADLNVVLK
EITSIRAKKALNLVPVDNLVRLLRVLDHQIHRAEGLSINDCEHMDAEVVSSIFCALESIH
AALAIMAYNGMPKQLYKEEIIERIMDFSRHQVMDVIFGSDPVYRALHKPPDIGIHEGEED
EELDGDFVSPNRKKRTTRSVKPRKSTSNKVSSAVSNILQKLDVILGFLKELCTIERLPDS
CILQLIKTCFTTFVVENIQLLQMKSISLISGIFYAYTQHRAYIMDEALQILLKLPSSKRM
PRTYPLPDEEQRQIQLITALLIQIVHSSSNLPDVLRESINSPSLEVSIDASYPTKSFESV
TEACCLFWSRVLQRLTNTKNQEAAELKTMIENLVIDLLTTLNLPEYPASAPLLEVLCVLL
LQNAGLKSKDVSVRSMAIDLLGTIAARLKQDAVRCREEKFWIVKELRSEDMIDRNLPKDA
CSVCLDTRIDKSLVRCHGCQRLFHVNCTGIRGHDIPNRGFHCQMCFSKKQLLALKSLSES
QSKDSGQNKRSKSGKTSQITEAVTNLEIVQQLLLNYLHDAATVDGLHLFTRWFYLCLWYK
DDPYSEQKFMYYVARLKSQAIVRDSGSVSSQITRESAKKITLALGRNSSFSRGFDKILQV
LLASLRENSPIIRAKALRAVSIIVEADPEVLGDKLVQTAVEGRFCDSAISAREAALELVG
RHIASYPDVGLKYFEKLAERIRDTGVSVRKRAIKIIRDMCTSNSNFSELSTACVEIISRV
NDEESSVQDLVCKTFYEFWFEEPSGSQHFGDGSSVPLEVAKKTEQIVQMLRRMPSLQPLV
TVIKRNLALDFFSQSAKAVGINPVSLASVRKRCELMCKCLLEKILQVTEMNTGEGEVQML
PYMRLLHAFCVVDPTLCAPASDPSQFVITLQPYLKSQADNRVAAQLLESIIFVIDSVMPL
LRKLPQSVAEELEQDLKQMIVRHSFLTVVHACIKCLCSVSKVAGKGSTIIEHLIQLFFKR
LDALGFSNKQNFQQVGRSLFCLGLLIRYSSSLLCASASNNSLHVASSLNLFKKYLQAEDF
VIKVRSLQALGYVFIARPECMLEKDVGRILEATLSSNTDTRLKMQSLQNMYEYLLDAESQ
MGADNASENEVSNTAVGGPSVPVAAGAGDTNICGGIVQLYWAKILERCLDVNEQVRQSAL
KIVEVVLRQGLVHPITCVPSLIALETDPQEVNSKLAHHLLMNMNEKYPSFFESRLGDGLQ
MSFMFIRAMNKGGSQSLKPQSKAPDIMSGKSDPASFTHARLGVSRIYKLIRGNRISRNKF
MASVVRKFDTPSWSDSVVPFLIYCTEILALLPFTSPDEPLYLIYSINRIIQVRAGTVEAN
MKGFLQFLQAGSQKINGSASIQTEPNQPVRCETETMVINAKIEEGLEGNHVGVDYGSVDS
YMPHLASLNPHGISNADMQMIQVECLAAGALQLLLRLKRHLKIVYDLNDARCQAYSPNEP
PKPGEGFSRQSLPFNVSEINIEPPKNYEDFVRRYQDFKNALKEDTVDYAIYTANIKRKRP
PPRRSRKSGRVMGGGDEDDEDYEDWGSGARTINSGRRSSSRLRQQF
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacatcaagtagtagtggtgttccacaaggtttaataagtttatcgaataca
gtgcacagtgaaattgcaccgtctttgccgttagcgtcactacctgtgttctgcggtgca
gtggatcaggaccttagattgttcgatgattatgagcgaaggagtaataaatcatctaga
tccttgaataatcgaagtgatgtacttggacacgctgccaaaattgctgatctgcttcat
aataccgatgtttcttatttgaaccttagagctgatgcaagtcctcaaccttgtggtttt
gtggggcaccttgacctgcataatgaagtgcttagatgtaactctgaagcctttgctcta
ataaatgcaggccccattaaggagactgcacgaaatcgcaaggctgattcaagtcctctt
gagagtatacctgctgtccaacttccacgacaaggcactgtagagatcaacaattatcag
catgaccatattactagtgatgttactgcatcttctaggaaaccaaaagtcaagaagaaa
ggaagggcggacaccttactatcaagtggtcctgatgcttctgaatgtcaagatgcagtt
gtagcaggtttctgtgagatgttggaagatttttgtggcagggcagaaatgtttagtgat
gagcgggacgaaagagaatttttaccaatgtctgcggcagatcttaatgttgttctgaag
gagatcacatctatccgagctaagaaagcactgaatttggttccagttgataatctagtg
agattacttagggtcttagatcaccagattcatcgagcagaaggtttatcaattaatgat
tgtgaacatatggatgctgaggttgtgtcatcgattttctgtgctttagagtccattcat
gcagctttagctataatggcttacaatgggatgcctaagcaattatataaagaagaaatc
attgaaagaatcatggatttctctcggcaccaagttatggatgttatctttggtagtgat
cccgtataccgtgcgctgcacaaaccacctgatatagggattcatgaaggtgaagaagat
gaagagcttgatggggattttgtttcaccaaataggaagaagagaactactaggagtgtg
aaaccaaggaaatcaacatcaaacaaggtttcttctgctgttagtaatatacttcagaag
cttgatgtgattcttggttttcttaaggagttgtgcactatagagcgcctaccagacagt
tgcattctccaacttatcaagacttgtttcacaacatttgtggttgagaatatccagctt
ttgcaaatgaaatcaataagcttaattagtgggatattttatgcatacacacagcatcgt
gcttatataatggacgaggcacttcagattcttttgaagttaccctcttctaagcgcatg
cccagaacttatcctctacctgatgaggagcagaggcaaattcagctcatcactgctctt
ttgattcaaatagttcacagcagttcaaaccttccggatgttttgagggaatcaattaac
agtccttcactagaagtctcaattgatgccagttaccctaccaaatcctttgagtcagtc
actgaagcttgctgtcttttctggagtcgtgttcttcaacgtctaacgaacacaaaaaat
caagaggcagctgagttgaagacaatgattgagaatcttgtcattgatctgttaactact
ttgaatttgcctgaatatcctgcctctgctcctcttctagaggttctttgtgttttactc
cttcaaaatgctgggctgaaatctaaagatgtttctgttcgttcgatggccattgacctt
cttggcacaattgctgcaaggctgaaacaagatgcagtccgctgtagggaggagaaattc
tggatagtaaaggagttgagaagcgaagacatgattgaccggaatcttcccaaggatgca
tgttctgtttgtttggataccaggattgacaaatcgcttgttcgatgccatggttgtcag
agactgtttcatgtcaattgtactggaattaggggtcatgatattcctaatcgcggcttt
cattgtcagatgtgtttctccaagaagcaacttcttgcactgaaatcactaagtgagtct
cagtccaaggattctgggcaaaataaacgtagtaagtcaggaaagacgtcacaaattact
gaggcagtcacaaatttagagattgttcagcagctactactcaactatctccatgatgct
gcgactgtggatggtttacatctatttactcgctggttttatctttgtctttggtacaaa
gatgacccttattctgagcaaaagttcatgtattatgttgcacgattaaaatcacaagca
attgtgcgcgattctggttctgtttcttcacaaatcacaagggagtctgctaaaaagatt
actttagcattgggacggaatagttctttctctagaggatttgacaagattctgcaagtg
cttctggcaagtttgcgggagaactctccaatcattcgtgcaaaggcattgcgagcagtt
agcatcattgttgaggctgatccagaggttttgggtgacaagcttgtccaaacagcagtg
gaagggaggttttgtgactctgctatatctgcccgagaagctgcattggaacttgtaggc
aggcatattgcttcatatcctgatgttggtctgaagtactttgagaagttggcggaaagg
ataagggatactggagtaagtgtgcgaaagcgtgctatcaaaatcatacgggacatgtgc
acttcaaattctaacttctcagagttgagtactgcttgcgttgaaattatttcccgagta
aatgatgaggaatccagtgtacaggacctggtctgcaaaacattttacgagttttggttt
gaagaaccttctggttcacagcatttcggagatggaagttctgttccacttgaggtggct
aagaaaacagagcaaattgttcagatgctgagaaggatgcccagtcttcaacctcttgta
actgtgattaaacgcaacttagctcttgatttcttttcacaatctgctaaagctgttggc
atcaaccctgtgtcccttgcttcagtccgtaagcgctgcgaattgatgtgcaagtgctta
ctggagaaaatactgcaggtgacagagatgaacactggagaaggagaggtgcagatgcta
ccatacatgagactcttgcatgctttttgtgttgttgatcctactctatgtgcaccagct
tctgatccttcccagtttgtgatcaccctacaaccttatttgaagagtcaggctgataat
cgagttgcggcccagcttttggagagtataatctttgtaattgattctgttatgccttta
ctacggaagcttcctcaaagtgttgccgaagaactcgaacaagatctgaagcaaatgatc
gttcggcattctttcttgacagttgtccatgcttgcatcaagtgcctctgctctgtaagt
aaagtcgctggaaaaggttcaactattattgaacaccttatccagttattcttcaaacgc
ctagatgccctaggtttcagtaacaagcagaactttcagcaagtgggccggtctcttttc
tgcctgggtttgctaatacgttacagtagctctttgttgtgtgcatctgcttccaataac
agcttacatgtcgccagcagcctcaacctatttaagaaatatctacaggccgaggacttt
gttatcaaggtccgctcattgcaggcactgggctatgtttttattgctcgtcctgaatgt
atgctggaaaaggatgtaggcagaattttggaggccacactttcttctaatactgataca
cgactcaagatgcaatcactgcaaaacatgtatgagtatcttcttgatgctgaaagtcaa
atgggagcagataatgcaagtgagaatgaagtttctaatacggcagttggtggtcctagt
gtgcctgttgctgcaggggctggtgataccaacatttgtgggggaatagttcagttgtat
tgggctaaaatcttagaaagatgcctggatgtgaatgaacaagtgcgtcagtctgctctt
aagattgtggaagttgtattgcgtcaaggtcttgtccatcctattacctgtgttccctct
ttgatagctcttgaaacagatcctcaggaggtgaactcaaagctggctcatcatttgttg
atgaacatgaatgagaagtatccatccttctttgagagccgtcttggtgatggtctacaa
atgtcatttatgttcatacgagccatgaataaaggtggttctcaaagtttaaaaccccag
tccaaagctccagatatcatgtcaggaaagtcagaccctgcctcatttacccatgcaagg
cttggggtgtctcgaatctataagctcatccgtggaaatcgtatttcaaggaacaaattt
atggcctcagttgtgcgcaaatttgatacaccaagctggagtgattcagtagtcccattt
ttgatatactgcactgaaattcttgctttgcttccattcacttcgcctgatgagcccctt
tatctgatctattctataaatcggattattcaagttagggctggcacggtggaggcaaat
atgaagggatttttacaatttttacaagcaggttctcaaaaaataaatggaagtgcgagc
attcagacagagcctaatcaacctgttaggtgtgagactgaaacaatggttatcaacgca
aaaatcgaggaaggcttggaaggtaatcatgtcggtgtagattatggatcagtggattca
tatatgccccatctggcatcattaaatccacatggcatatcaaatgctgatatgcagatg
atccaggtggaatgtctggcagctggtgctttgcagctgcttctgaggctaaagaggcac
ctcaagattgtgtatgatctaaatgatgcccgttgccaggcatattctccaaatgaacct
ccaaaacctggggaaggtttttcaaggcaaagtcttcctttcaatgtgagtgaaattaac
atagagcccccaaagaattatgaagactttgtccggagatatcaggatttcaagaatgca
ttgaaggaagatacagtggactatgcaatctacacggcgaacattaaaaggaaacgcccc
cctccaagaagaagcaggaaatctggtcgagtgatgggtggtggtgatgaagatgatgaa
gactatgaagattggggtagtggagcgaggactattaatagtggcagaagaagcagtagc
aggttaaggcagcaattctaa
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integrated database retrieval system
