KEGG   Lycium barbarum (goji berry): 132618486
Entry
132618486         CDS       T09483                                 
Name
(RefSeq) pre-mRNA-processing protein 40A
  KO
K12821  pre-mRNA-processing factor 40
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132618486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lbb03041]
    132618486
Spliceosome [BR:lbb03041]
 Complex A
  U1 snRNP components
   U1 related factors
    132618486
 Complex B
    132618486
SSDB
Motif
Pfam: FF WW WW_TCERG1 FF_RHG35_4th
Other DBs
NCBI-GeneID: 132618486
NCBI-ProteinID: XP_060189507
LinkDB
Position
11:56118993..56155829
AA seq 1033 aa
MASNPPPSGPQPLWPPSVGSTPPQGFGSSFPMQFRPALSTQQGQHFAPPISASPQYRPVG
QTPNAGMPPGQGQIPQFSQTMQQFPLRPGQPVHGTPSSQAIQMPYVQSSMPQPQQVIPPL
NSHMPSVNGAGNPFSSSYTVQSSSQMHVPTFPAGGQPWFSSGSQTTPVAAPNLLTSHQSS
AVARAVPASTSSQQTASDWQEFEAADGRRYYYNKITKQSSWEKPLELMTPLERADASTVW
KEFTTADGRKYYYNKETKQSKWTMPDELKLARELAENAAGQVVQTGTSTTSGVQVSEAVT
PTEQPPAVTPVSSTPSSTVSGVASSPVPVTPAVSDVNAPPLVVSGSSAIPTVSPAVTSSA
GVSSPVVSASTGSAALANAYHTQMSGIENLSPQVASSFSGACIQDIEEAKKGMAVAGKIN
VVPAEEKTADEEPFLYATKQEAKNAFKALLESSNVESDWTWEQTMRVIINDKRYGALKTL
GERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKMLEESKELTSSTRWSKAVTMFEDDE
RFKAVEREADREDLFRNYLVDLQKKERAKAQEEYRRNRLEYKQFLETCGFIKVDTQWRKV
QDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQRKLHKEQLRRAERKNRDAFRKMME
EHIAAGTLTAKTSWRDYCLMVKTSVAYQAVASNTSGSTPKDLFEDVAEELEKQYHEEKIR
VKDVVKSEKITISSTWTFEDFKVAVLEGIGSPSIHDVNLQLIFEDLIERAKEKEEKEAKK
RQRLAKDFTDKLSTIKEITDSSSWEECKELVEDSSEFRAIGEETISRAVFEEYVAWLQEK
AKEKERRREEEKAKKEKEKEEKEKRKDKERREKEREKEKEREKEKERGKERSKKDEPDCE
TMDVTDSYENKEERKREKDKERKHRKRHHSSNDEVTSDKDEKEEPEKDKERKHRKRHHSS
NDEVASDRDEKEESRKSRRHSSDRKKSKKHAHSPESDGESRHKRHRRDHRDGSRRNGGYE
ELEDGELGEDGES
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggccagtaatcctcccccatctggtccacagcctctttggcctccttcagttggatcc
actccacctcaaggttttggttcatcatttcccatgcaatttcgacctgctctatcaaca
cagcaagggcagcactttgctccaccaatttcagcctctccacagtatcgccctgttgga
caaacaccaaatgctggaatgcctcctggtcaaggtcaaataccccagttttctcaaaca
atgcagcagtttcccctaaggcccggccagcctgttcatggtacaccttcatctcaggca
attcagatgccatatgtccaatcaagtatgccacagcctcaacaagtcattccccctttg
aatagtcatatgcctagtgttaatggtgctggaaatccattctcatcatcatatacggtt
caatcttcatcccaaatgcatgttcctactttccctgcgggcggacaaccttggttttca
tctggaagtcaaacaacaccagtggctgcccctaatctgctgaccagtcaccaatcgtca
gctgtagctcgagcagttccggcgagcacatcgtcacagcagactgcgtctgactggcaa
gagtttgaagctgctgatggtagacgatattattacaataagattacaaagcaatctagc
tgggagaagcctttggagctgatgacacctttagagagagctgatgcgtcgactgtatgg
aaagaattcacaactgcagatggtcgaaagtattactacaacaaagaaacaaagcagtcg
aagtggacaatgcccgatgaactaaagttggctcgtgaactggctgaaaacgctgctggt
caagtagttcagactggaacaagcacaacttctggtgtgcaagtcagtgaagctgtgacc
ccaacagaacaaccacctgctgtcaccccggttagctccaccccttcttcaacggtttct
ggagttgcttcaagccctgttccagttacacctgctgtttctgatgttaatgctccacct
ctggtggtttctggatcatcagccattcctactgtgagccctgctgtgacaagttcagct
ggtgtctcttcccctgttgtttcagcgagtacaggatctgctgctctagctaatgcctat
catacacaaatgagtggcattgaaaatttatctcctcaagttgctagttcttttagcgga
gcttgtattcaggatattgaggaggcaaagaagggcatggcagttgctgggaagattaat
gtggtacctgcagaggagaaaacagcagatgaagaaccttttctatatgccactaagcag
gaggctaaaaatgcattcaaagctctattagagtcttctaatgttgaatctgattggaca
tgggagcagacaatgcgagttataattaatgataaacgatatggtgctctgaaaactctt
ggtgagcggaaacaggccttcaatgagtacctgatgcaaaggaagaaacaggaggctgag
gagaggcgccttagacaaagaaaggcaaaagaggaattcacaaagatgttagaggagtcc
aaggaactcacttcatctacaagatggagtaaggcagtaacaatgtttgaggacgatgaa
cggttcaaggctgttgaacgagaggctgatcgtgaagatctcttcaggaactacttggtg
gatcttcagaaaaaggagagggcaaaggctcaagaggagtatcgacggaatagattggag
tacaaacaatttttggagacttgtggctttatcaaggtagatacccagtggcgcaaagtc
caagatcttttggaagatgatgaaagatgttcgcgccttgaaaaacttgatcgattagag
atttttcaggaatacatccgtgacctggagaaggaggacgaagaacaaagaaaattacac
aaggagcaactgaggcgcgcagagcgcaagaaccgggatgcatttcgaaagatgatggag
gagcatatcgctgcaggcacgcttactgcgaaaacatcttggcgtgattattgtctgatg
gttaaaacatctgtggcttatcaggctgttgcatcaaatacttctggttcgacaccaaag
gatttgtttgaagatgtcgctgaagagttggaaaaacagtaccacgaagagaagattcgc
gtaaaagatgtagttaagtcagaaaagatcacaatctcatcaacatggacatttgaagac
tttaaagttgctgttttggaaggaattggttccccttccattcatgatgttaatctacag
cttatttttgaggatctaattgagagagcaaaggaaaaggaagagaaagaagctaaaaag
cgtcaaagacttgcaaaggatttcactgacaaacttagtaccatcaaggaaataactgat
tcctctagttgggaggagtgcaaagaacttgtggaggacagctcagaattcagagctatt
ggtgaagagacaatctcaagagcagtctttgaggaatatgttgcatggttgcaggaaaag
gcaaaggaaaaggaacgtaggcgagaggaggaaaaggccaaaaaagagaaagaaaaagag
gagaaagagaagagaaaggataaggagagaagggaaaaagagagagagaaggaaaaagag
cgtgagaaggagaaagaaaggggaaaggagcgatcaaagaaagatgagccagattgcgaa
actatggatgtaacagacagctatgaaaacaaagaagagagaaaaagagaaaaagacaaa
gagaggaaacatcggaagcgacaccatagctctaacgacgaggtgacttctgacaaggat
gagaaagaggagcctgaaaaagacaaagaaaggaaacaccggaagcgtcaccatagttct
aacgatgaggtggcatctgacagggacgagaaagaggaatctagaaagtcacgccgacat
agcagcgatcgtaaaaagtcaaagaagcatgcacattcacctgaatccgatggtgaaagt
cggcataaaagacacagaagagatcatagggatggatcacgtcgaaatggtggttatgaa
gagctagaagatggtgagcttggtgaagatggagaaagttga

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