Lycium barbarum (goji berry): 132618605
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Entry
132618605 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132618605
KO
K14794
ribosomal RNA-processing protein 12
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132618605
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
90S particles
Other 90S particles
132618605
Pre-60S particles
Other pre-60S particles
132618605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
MMS19_N
Hemerythrin
DUF951
Cnd1
Motif
Other DBs
NCBI-GeneID:
132618605
NCBI-ProteinID:
XP_060189622
LinkDB
All DBs
Position
11:32344195..32365088
Genome browser
AA seq
1299 aa
AA seq
DB search
MEGIEMEHPLAENTSDDFCNTVLLQFSESNNEHHVHICTAIGTMSQELRDQNFPLTPIAY
FGPTCLSLQRLYTAVGPEGPPSHLIDALSAILSLIVPRIKKGILMNKYGFLSDIMIQLLG
LKNIGVEGVVSCLKCVMHLLIVGDKGNWSGVAQLYGVFIGYIMDDRQKVRKMSHNCLRDV
LQNFQSSPMLAPLLAPASEAITNLFERSLLLAGGTTGNASERPKGAQEVLHVLDALKLCL
PFMSSKYLNSTLKYFKSLLELRQPLVNRRITDGLNALCIHPTAEISPEVLLDLLGSLAAS
VSANESSGDTLTFTARLLGIGMRRVYSINRQLCVVKLPVMFNSLSDVLGSEHEEAIRAAL
EALKILIHECIDENLIKQGVDNIIDSSTDMRKSGPTIIEKICATIESLLTYHYGAVWDMS
FQVVVAMFDKLGCYSAHLLKGTLQSLADMQKLPDEDFPYRRQLHECVGSAVGAMGPESFL
TLVPLKLDAQDLSESNIWLFPILKQNIVGAHLSFFTNSILSMVGAMKQRSAMLDREGKIY
SARTIDGIVYSLWSLLPSFCNYPVDTAESFKDLEKVFCKAIHEEPDVCGIICSSLEILIQ
QNKSIIEGEVDLSDTGISVPRERAIAHYNQQVADDNLNALSVSAHELLPVLREVFLQSSN
DTCGFLQRTIGVLASIADKVEVKKNHPSKGNKRVVRGLFTKTMRELLKVTQEVGEAEEDK
KSYSMQIDDSSSKSSSSQRAQLFDLAVSFLPGLNAQEIGVLFDALKSALKDEEGLIQKKA
YKVLSMILQDHDEFISSMPEELLNLMIEALPACHFSAKRYRLDCLYFLIVHVMKDESEQR
RRDSITSFMTEILLALKEANKKTRNRAYEILVKIGHAYADEERSGRKENLQQLFNMIAGG
LAGETPHMISAAVKGLARLAYEFTDLVSAAYSVLPLTFLLLQRGNKEIIKANLGLLKVLV
TKSPAEGLQAHLRSMVEALLGWQDNTKNHFKAKVKLLIEMLIKKCGLDAVKEVMPEEHMK
LLTNIRKIKERRDRSLASNSEESRSRMTKATTSRLSRWNHTKIFSEFDDGESENSDAESM
DTKTTAGRRSKATLVSDSKASLLRSKKTRKAAKSLQEDLFDQLDDEPLDLLDQKKTRSAL
RASGNLKRKPESDDEAEIDSEGRLIIHEGDKKQKRVKPPTDNLDVRSKAGSRFSESSKKT
VKRRKTSDSGWAYTGTEYASKKAGGDVKRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGM
ASIVKLTKNLEGKSASAVLSARRAKTKKKASAKKGYGEV
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcattgaaatggaacaccctttagctgaaaacacctcagatgacttctgcaac
accgtattattgcaatttagcgaatcgaataacgagcaccacgtccacatttgcaccgcc
attggtacaatgtcacaagagttaagagaccagaacttccctcttacaccaattgcgtat
ttcggaccgacttgcttgtcgctccaacgattatatactgcggtgggccctgaaggaccc
ccgtcacatcttattgatgcactttccgcgattttgtcactcattgttccgagaataaag
aaagggattttgatgaataaatatgggtttttgtcggatattatgattcaacttcttgga
ttgaagaatattggtgttgaaggggttgtttcgtgcttgaagtgtgtaatgcatttgtta
attgtgggggataaagggaactggtctggtgttgctcaactctatggtgtgtttattggg
tatataatggatgatcgacaaaaggtgagaaagatgtcacataattgtcttcgcgatgtc
ctgcaaaactttcagtcatcacctatgcttgctcctctattggcacctgcaagtgaagcc
atcacaaacctctttgaaaggtcccttctacttgcaggaggaacaactggaaatgcctct
gaaagacccaaaggagcacaagaagtcttacacgtgctggatgctctgaaactttgtctt
ccttttatgtcttcaaagtacttgaatagcactttgaagtacttcaaatccttattggaa
ttgcgtcagcctcttgttaataggcgcattacagatggtttgaatgctctttgtatccat
ccaacagcagaaatatccccagaagtgcttctggacctcttgggttcattagctgcttcg
gtttctgcaaatgagtcatctggtgatactttgacattcacagctcgcttgcttggcatt
gggatgagaagggtatattcaattaacaggcaattgtgtgtggttaagcttcctgtgatg
ttcaactctcttagtgatgtactgggttctgaacacgaggaagctataagggctgcactg
gaggcactcaagatcttaatacatgaatgcattgatgaaaacttgatcaaacagggtgtg
gataacataattgattctagtactgatatgagaaaatctggaccaactattattgagaaa
atctgtgccacaattgagagcttgcttacctatcactatggagcagtctgggacatgtca
tttcaagtagtggtcgccatgtttgataagctaggttgctattctgctcaccttctaaag
ggaacacttcagagtttggctgatatgcaaaagctgccagatgaagactttccgtaccgt
agacagctgcacgaatgtgttggatcagctgttggtgcaatgggacctgaatcttttcta
actcttgttcctcttaaattggacgcacaagatttatcagagtccaacatctggcttttc
ccaattttaaagcaaaacattgttggtgcacatttgagtttttttaccaactcgattttg
tcgatggttggagctatgaagcagaggtctgcaatgcttgaccgcgagggaaagatatat
tcagcgagaactattgatggaatcgtgtactcattgtggtcattgttaccttcattttgc
aattaccctgtggacactgctgaaagcttcaaggatctagagaaggttttctgtaaagct
atacatgaagagcctgatgtttgtgggataatatgctccagtttggagatcctcattcag
cagaacaagagcattatagaaggggaagtggatttgtctgatactggaataagtgttccc
agagaacgagccattgcacattacaaccagcaagttgcagatgataacttgaacgcgttg
agcgtttctgctcatgaactgctgcctgttctccgtgaagtcttcttgcaatcctctaat
gatacttgtggatttttgcagagaacaattggtgtattggcctctattgctgacaaagtg
gaagttaaaaaaaaccacccatccaaaggaaacaaaagggtagtaagagggctatttacg
aaaaccatgcgggagcttttgaaggtgacccaagaagttggggaggcagaggaggacaaa
aaatcctattcaatgcagattgacgactcatccagtaaaagttcttcttcacagagggcg
cagttatttgatctggcagtttcattcttgcctggtttaaatgctcaagaaattggtgtg
ctgtttgatgctttaaagagtgctttaaaggacgaggaaggcttgatccagaagaaggca
tataaagttctctccatgatccttcaggaccatgatgaatttatttcaagtatgcccgaa
gagctgcttaatttgatgattgaagcactacctgcatgtcatttttcagccaaacgttac
agacttgactgcctatactttttaattgtccatgttatgaaggatgaatcagaacaaagg
aggcgggacagtattacttcttttatgactgaaattttgcttgcactcaaagaggctaac
aagaaaacaaggaaccgagcgtacgagattcttgtcaagattggccatgcttacgcagat
gaagaaagaagtggcagaaaggagaacctgcagcagcttttcaatatgattgctgggggt
cttgccggggaaacacctcatatgatcagtgcagcggttaaaggcttagctcgcctggcc
tatgaatttacagatcttgtttctgctgcttacagtgtcctaccattaacatttcttctc
cttcagagagggaacaaagaaataattaaggctaatttagggctgttgaaggtactggtc
acaaagtcgccggctgagggattgcaagcacatttaaggagcatggtagaggcccttctt
ggttggcaagataataccaagaaccatttcaaagccaaggttaagctgcttattgaaatg
cttatcaagaagtgtggattggatgctgtaaaagaggtgatgcctgaagagcacatgaaa
ctccttaccaacataagaaagataaaggagcgaagagataggagcctcgcctcgaattct
gaagaaagcagatctcgtatgacaaaagcaacaacatcaaggctaagcagatggaatcat
acaaaaatcttttccgagtttgatgatggagaatctgagaatagtgatgcagaatctatg
gacacgaaaactactgctggtcgtaggagcaaggctacattagtatcagactccaaagca
tctttattacggtccaagaaaacacggaaagcagccaagagtttgcaggaagatctgttt
gatcaattagatgatgagccgctcgacttacttgaccagaagaagactaggtcagctctt
agagcatctggcaatctcaagcggaagcctgagtctgacgatgaggcagagatagactct
gaaggccgtttgattattcatgagggagataagaagcaaaaacgagtcaagccacctact
gataacttggatgtaaggagcaaagcaggaagtcgcttttctgagagctcaaagaaaact
gtgaagcggaggaaaacatctgattcaggatgggcctacactggaactgagtatgctagc
aagaaggcgggtggtgatgtgaagaggaaagacaaacttgagccctatgcctactggccc
cttgaccgcaagatgatgagccggaggcctgaacatcgggcagcagcacgaaaaggtatg
gcaagcattgtgaagctaacaaagaatcttgaaggtaagagtgcatcagcagtgctgtcc
gcaaggcgagctaagactaaaaagaaagccagcgcaaaaaagggttacggtgaagtctga
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