Lycium barbarum (goji berry): 132618660
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Entry
132618660 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132618660
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132618660
04121 Ubiquitin system [BR:
lbb04121
]
132618660
Ribosome biogenesis [BR:
lbb03009
]
Eukaryotic type
90S particles
Other 90S particles
132618660
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
132618660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
NBCH_WD40
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
eIF2A
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
WDR54
Motif
Other DBs
NCBI-GeneID:
132618660
NCBI-ProteinID:
XP_060189668
LinkDB
All DBs
Position
11:13672576..13680768
Genome browser
AA seq
452 aa
AA seq
DB search
MRLKAISRSTDEFTRERSQDLQRVFRNFDPNLRPQEKAVEYVRAVNAAKLEKIFARPFVG
DMDGHIDAVSCMAKNPNHLKGIFSGSMDGDVRLWDLATRRTVRQFPSHQGAVRGLTMSTD
GGILVSCGTDCTVRLWKVPVATLMESDDGSDNSSQPLAVHVRKNAFWGVDHQWDGDHFAT
AGAQVDIWNHNRSQPVNSFEWGKDTVISVRFNPGEPNLLATSASDRSISIYDLRLSTPAR
KVIMQTKTNSIAWNPMEPMNFTAANDDHNCYSYDVRKLNEAKCVHKGHVSSVMDIDYSPT
GREFVTGSYDRSVRIFQYNGGHSKETYHTKRMQRVFCVKFSCDASYIISGSDDTNLRLWK
AKASEQLGVILPRERKRHEYLEAVKNRYKHLPEVKRIVRHRHLPKPIYMATKQIREITES
ERRREEKRKAHSAPGSIQNASLRTLRIVKVEM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgaaagcgatatctcggtctacggatgaatttactcgtgaacgtagtcaggac
ctccagagagtttttcggaacttcgatcccaaccttcgacctcaagagaaggcagtggaa
tatgttcgtgctgtgaatgcagcaaaactagagaagatatttgcaaggccattcgtcgga
gatatggatgggcacattgatgctgtctcttgcatggcaaagaatcctaatcacttgaaa
ggaatattttctggctccatggatggtgatgttcgcctatgggatttggctaccaggcgg
acagtacgtcagtttcccagtcaccaaggtgcagtacgtggtttgaccatgtccacagat
ggcggtattcttgtatcatgtggaactgattgcactgttaggctctggaaagttcctgtt
gctactctaatggagtcagatgatggatctgataactcatcccagccattggctgttcat
gttcggaagaatgcattctggggtgttgaccaccaatgggatggtgatcattttgccaca
gctggtgctcaagttgacatttggaaccacaacaggtctcagccggttaatagttttgaa
tgggggaaagacacagttatatctgttcggtttaatccaggggagcctaatcttttggca
acatcagcaagtgatcgtagcataagcatctatgatttacggctttctacaccagctaga
aaggttattatgcagacaaaaactaattctatagcatggaatcccatggagccaatgaat
tttactgccgctaatgatgatcacaattgctacagttatgatgttagaaagttaaatgaa
gccaaatgtgtgcataaaggtcatgtctcttcagtgatggatatagattattcaccaacc
ggtcgagaatttgttactggatcttatgatagatcagtgagaattttccaatataatggt
ggtcacagcaaggaaacgtatcacactaagaggatgcagagggtattctgtgtgaagttc
agttgcgatgcaagttatattatctcaggaagtgatgataccaaccttcgtttatggaaa
gcaaaagcatctgaacaattgggagttattttgccaagagagcggaaaagacatgaatat
ttggaggctgtcaagaatcgttacaagcatcttcctgaagtcaagcgcatcgtcagacac
aggcacttgccaaaaccaatctatatggcaactaaacaaatacgtgagatcactgaatct
gagaggcggagagaggagaagaggaaagctcacagtgcaccaggaagcattcaaaatgct
tcattgcgaacgctaagaattgtcaaagttgagatgtag
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