Lycium barbarum (goji berry): 132618674
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Entry
132618674 CDS
T09483
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00906
Carotenoid biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
132618674
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lbb01006
]
132618674
Enzymes [BR:
lbb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
132618674
Prenyltransferases [BR:
lbb01006
]
Terpene biosynthesis
Squalene/phytoene synthase
132618674
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
132618674
NCBI-ProteinID:
XP_060189676
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All DBs
Position
11:complement(116614393..116620506)
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AA seq
412 aa
AA seq
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MSVALAQVNVSPCEVSNGTGFLESVREGNRIFGSSRHRNSRFSCLGGSRTKNGRIFSVRS
AIVATPGGEMTTMTSEQKVYDVVLKQAALVKRQLRSTDELEVKPDIPIPGNLDLLSEAYD
RCSEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPQALDRWED
RLEDVFNGRPFDMLDAALSDTVSNFPVDIQPFRDMIEGMRMDLRKSRYRNFDELYLYCYY
VAGTVGLMSVPIMGIDPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQD
ELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARKFFDEAEKGVTELSGASRWPVWASLLL
YRKILDEIEANDYNNFTRRAYVSKPKKFIALPIAYAKSLVPPTSTRTLSPLS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgccttggcacaggttaatgtatctccttgtgaggtctcaaatgggacagga
ttcttggaatccgtccgggagggaaaccggatttttggttcatcgaggcataggaattct
agattttcttgcttaggaggatcaagaactaaaaatggacggattttttctgtacggtct
gctatagtggctactcctggtggagaaatgacgacgatgacatcggaacaaaaggtatat
gatgtggttttgaagcaggcagccttggtgaagaggcagctgagatctaccgacgagtta
gaagtgaagccggacatacctattccgggaaatttggacttgttgagtgaagcatatgat
cggtgtagtgaagtatgtgcagagtacgcaaagacgttttacttaggaactttgctaatg
actccagagagaagaaaggctatctgggcaatatatgtatggtgcagaagaacagatgaa
cttgttgatggcccaaatgcatcacatattactccacaagccttagatagatgggaagac
aggctagaagatgttttcaatgggcggccatttgacatgctcgatgctgctttgtccgat
acagtttccaactttccagtcgatattcagccgttcagagatatgattgaagggatgcgt
atggacttgaggaagtcaagatacagaaactttgacgagctgtatctctattgttattat
gttgctggtacggttgggttgatgagtgttccaattatgggtatcgatcctgaatcaaag
gcaacaacggagagtgtatataatgctgctttggctttggggatcgcaaatcagctaacc
aacatactcagagatgttggagaagatgccagaagaggaagagtctacttgcctcaagat
gaattagcacaggcaggtctctccgacgaagacatatttgctggaagagtgaccgataaa
tggagaatcttcatgaagaagcaaatccagagagcaagaaagttctttgatgaggcagag
aaaggagtgacagaattgagcggagctagtagatggcctgtgtgggcatcattgctcttg
taccgcaagattctcgatgaaattgaagccaatgactacaacaacttcaccaggagagct
tatgtgagcaaaccaaagaagtttattgcattacccattgcatatgcaaaatctcttgtg
cctcctacaagtacaagaactctgtctcctctaagctaa
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