Lycium barbarum (goji berry): 132618987
Help
Entry
132618987 CDS
T09483
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132618987
Enzymes [BR:
lbb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132618987
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132618987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-RING_16
zf_RING_Vps8
zf-C3H2C3
zf-RING_UBOX
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
132618987
NCBI-ProteinID:
XP_060189954
LinkDB
All DBs
Position
11:6701050..6707158
Genome browser
AA seq
395 aa
AA seq
DB search
MVRRSMSDNNHIINVGADQRSQEYIHPEPCVLYGNFTAFPHPNVHTVVPAAGNIGNFYLY
HLPNHQEGAVIYGMPASNGVQQLHPATNVAAFATSSNHYNPYVATPSASTHFLFPVNHGL
NNSWAWNQAAPLPYLPGGAGGYVDAGFMGVQGNQVTASNGGLTSFLHAPVPQGSPHHHQM
PPNMQYTVGHAMGFSPQMTASARVYLQNSSSNSSNNPSQGVVPFSPTGSRMYRPHPREFM
PEANTRHRNLPNMRVLPENRVPMLDVPAYHEVGNVVDQFRDMRLDIDHMSYEELLALGEQ
IGKVTTGLPEEAIVTNLKTRIFLSTETPCALESVACEDHKTDCVICQIDYADQDKIGILE
CRHEYHEDCIKKWLVVKNICPMCKSTALSTKKQDL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaaggagtatgtcagacaataatcacataattaatgtgggagcagatcagcgg
agtcaagagtatatccatccagagccttgtgtattgtatgggaactttacagcttttcca
catccaaatgtccacactgtagtaccagctgcaggaaacattggaaatttctatttgtac
catctaccaaaccatcaagagggcgctgtaatctatgggatgccagcgtccaatggggtt
caacagctgcatcctgccaccaatgttgcagcatttgcaacatcatcaaatcactataac
ccttatgtggctacaccgtctgcatctacacattttctctttccagtaaatcatgggtta
aataattcatgggcctggaatcaggctgctcctttaccctatctgcctggtggtgccgga
ggctatgtagatgctggatttatgggtgtgcaaggtaatcaagtaactgccagcaatgga
ggtttgactagttttctgcatgcaccggttcctcaaggatcaccgcaccatcatcaaatg
ccacctaatatgcaatacacggtaggccacgccatgggcttctctccacagatgacagca
tctgcacgcgtctacctacaaaatagctcgtccaatagctctaataatccatcgcaaggt
gttgtaccattctcaccgactggctctaggatgtacagacctcatccaagggaattcatg
cctgaagcaaatactcgccaccgcaacctccctaacatgagagttttgccagaaaatagg
gtgccaatgctggatgttccagcatatcatgaagtgggtaatgttgttgatcagttcaga
gatatgcgtttggacatagatcacatgtcttatgaggagcttcttgcattgggggagcaa
attggcaaagtgacaactggtttaccagaggaagctattgttaccaatttgaaaacgaga
atatttttgtctaccgagactccttgcgctctggaaagtgttgcatgtgaagatcacaaa
actgactgtgtcatatgccagattgattacgccgaccaagataagattggcattcttgag
tgccgccacgagtatcatgaagactgtataaagaaatggttggttgtgaagaacatttgc
cctatgtgcaaatccacagcattgtctacaaagaaacaggacttgtaa
DBGET
integrated database retrieval system
