Lycium barbarum (goji berry): 132619087
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Entry
132619087 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132619087
KO
K10756
replication factor C subunit 3/5
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03030
DNA replication
lbb03410
Base excision repair
lbb03420
Nucleotide excision repair
lbb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132619087
03410 Base excision repair
132619087
03420 Nucleotide excision repair
132619087
03430 Mismatch repair
132619087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132619087
03036 Chromosome and associated proteins [BR:
lbb03036
]
132619087
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132619087
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132619087
DNA Replication Termination Factors
ELG1-RFC complex
132619087
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132619087
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132619087
Check point factors
HRAD17(Rad24)-RFC complex
132619087
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_16
nSTAND3
RuvB_N
Motif
Other DBs
NCBI-GeneID:
132619087
NCBI-ProteinID:
XP_060190038
LinkDB
All DBs
Position
11:111461831..111471727
Genome browser
AA seq
682 aa
AA seq
DB search
MESYYSASNRALHFKSSPRVKQIRKSGYEPSDTDTDWQESPSLELNLENVLTFDVSLNRR
RLSKSPYKSWRHEGDVQFPRLDLQKQSVSRNVSPFSKSEYRKPPNVRRNVSPFSKSEYRR
RHDTQSFSSSNRKQNNNEGAVTARANYSHRALYDTSRDRSRVEKENSHKSEPSGGEMNVM
LANAKSSRGLNNAISLNTNNMFRSTESISPSDIFFTKGCSVFTQSSKFDPMPRASSDRNV
SSVNKINQNGIRIISSSTILNSSSTISRQSSNLSRSAKKFTVKRQVKSQKEAWCSCIKKG
YSCRNSRKDQSPERGRHIDEASLIEKAFVVERLRQFWADKYQPASLEGFTYHKQQALLLS
HLVSSNEPLPHILLKGPSGSGKRALSMALLLEIYGDAICNEMRAMQVVVPVSSSPHHVEL
NVHLEPNARYALMALVQQISSEYALASEISRLNMKADSKVIVLYDVDKAVENMQHLIKWI
MDCYSDACKLILLCESGASIIELVKSRCTTIEVEAPLTHEIMEVLIEIARKEDLELSRGF
AAKIATKSKQNLRRAIMALEACKAHYYPFAEDQPISVGWEEAVVELAAEILADPTQTRLF
SIRGKFQKLLVEFVHPKLILLKLVEQFLKKVDAGLKRQIYYWHAYYDKRLPIGTSALLKL
EEFVAKFMSIYRKQSGNIHQLP
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggagagttattattcagcttcaaacagagccttacattttaaaagttcaccacgtgtg
aagcaaattaggaaaagcggatacgagccatccgacacagacaccgattggcaggaaagt
ccaagcctggaattgaatcttgaaaatgtattaacgtttgatgtgagtttaaatcgtaga
aggcttagcaagtccccttataaatcatggagacacgaaggtgatgttcaatttccccga
cttgatctacaaaaacaaagtgttagtagaaatgtgagccccttttcaaaatccgagtat
cgcaaaccaccaaatgttcgtagaaatgtcagtcccttttcaaaatctgaataccgacgc
agacatgatacgcaaagtttttcgagttcaaataggaagcaaaataataatgagggtgca
gttactgccagagcaaattatagtcacagggctctttacgacacttccagggatcgaagc
agagtagaaaaggaaaattcgcacaaaagtgaaccttcaggaggtgaaatgaatgtaatg
ttagccaatgcaaagagctcaagaggcctcaataatgccattagtcttaatactaataat
atgtttcgaagtactgaatctatttcaccaagtgatattttttttactaaggggtgttct
gttttcacccaatcaagcaagttcgatccaatgccccgagcatcgagtgataggaatgtc
agttctgtcaacaaaatcaatcagaacggcattaggattatttcatctagtacaattctg
aactcgagctctactataagtaggcagagcagtaatctaagtagaagtgcgaaaaagttc
acagtaaaaaggcaagttaagagtcaaaaagaagcatggtgttcttgtatcaagaaagga
tattcatgtagaaattcaagaaaagatcaatctcccgaaagagggaggcatatcgatgaa
gcttcgttaattgagaaggcatttgttgttgaaagattgagacaattctgggcggataag
tatcaacctgcttcattggagggattcacttaccacaagcaacaagctttactacttagt
catcttgtatcttcaaatgaaccactcccacacatcttgttaaagggtccttcaggatct
ggaaaaagagcactctcaatggctcttctgcttgaaatctatggagatgcaatttgcaat
gaaatgagggcaatgcaagttgttgtaccagtaagctcaagtcctcaccatgtggagcta
aatgttcatttggagcctaatgctagatatgcattaatggctttggttcagcaaataagt
agtgaatatgcactggcctcagaaataagcagacttaatatgaaggcagattccaaagta
atagttctttatgatgtggataaagctgttgagaatatgcagcacttaataaaatggatc
atggactgttattcagatgcttgtaagcttattctcttgtgtgaaagtggtgcatctata
attgagctagtgaaaagtcgctgcacaactattgaagtagaagctcccttaactcatgaa
atcatggaagttctcattgaaatagcaagaaaggaagaccttgaattatctagaggcttt
gctgctaagatagctaccaaatcaaagcaaaacttgcgcagggcaattatggctcttgaa
gcatgcaaagcacactactatccgtttgcggaggatcaaccaatctcagtaggatgggaa
gaagctgtagtagaacttgcagcagagattctagctgatccaactcaaacaaggttattc
tctattcgaggcaagttccaaaaacttctggtggagtttgtgcacccaaaacttattctc
ctgaaactcgttgaacaattcctcaagaaggttgatgcaggtttaaaaaggcaaatatat
tattggcatgcttattatgacaaaagactcccgattggaacaagcgctctattaaaatta
gaagaattcgtagcaaaatttatgagcatatacaggaaacaatcaggcaacattcaccag
ttaccctaa
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