Lycium barbarum (goji berry): 132619341
Help
Entry
132619341 CDS
T09483
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132619341
Membrane trafficking [BR:
lbb04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
132619341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_12
TPR_1
TPR_2
bL31_N
Motif
Other DBs
NCBI-GeneID:
132619341
NCBI-ProteinID:
XP_060190258
LinkDB
All DBs
Position
11:complement(5681493..5697715)
Genome browser
AA seq
1250 aa
AA seq
DB search
MANFLAQFQSIKTTCDHVVIAVEDVSDLWPLVKKGFEDHLPFKRAFLNNKTRNPVLVDEL
PAEYILTTDSRLRSRFPQEQSLFWFREPYATVVLVSCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAASHNDQATKMAKKVYAKLEVDFSSKKRERCCKLDINGPDTNFWDDLEAKI
MECIRNTLDRRIQFYEEEIRKLSEQRFMPVWNFCNFFILKESLAFMFEIAHLHEDALREY
DELELCYLETVKHRDFGGMDSGDDQAALLNPGKKALNQIVQDDSFREFDFRQYLFACQSK
LLFKLTRPFEVASRGHSFIISFSKALALHESILPFCTREVWVITASLALITATASQYKDG
QVAPDIEKEFYRVQGDLYSLCRTKFMRLAYLIGYGLYIERSPVNSAALSMLPWPKPGVWP
SLPPDASSEVLVKEKMMFEESVRVKHFGIQRKPLPLEPSVLLREANRRRASISAGNVFEM
FDGQPNAIDGSGSMSSPAKAQLISMSRTNSSPGNFESSISRPLRLSEICVAAEHALRSTI
SDAELWKSLSSVQEFEQKYLELSKGAANNYHRSWWKRHGVVLDGEIAAVFHKNGNYDLAA
KLYEKVCALYAGEGWQNLLAEVLPNLAECQKELGDQAGYLSSCVRLLSLDKGLFSSKERQ
AFQSEVVRLAHSEMEHTVPLDVSSLITFSGNPGPPLQLCDGDPGTLSVTVWSGFPDDITL
ESLSLTLTATTNTDEGVKAIKRAGATILKPGRNTIMVNLPPQRPGSYVLGVLTGKIGLLS
FRSHSFSKGAPADSDDFMSYEKPTRPILKVFKPRSLVDLTAAVSSALLMNEPQWVGIIVK
PISYSLKGAILHIDTGPGLTIEKSHKIEIERHMNGHVDESDHPEGSKDDDSSAASPEVKQ
LSRHDGIIELPDWASNITSVLWIPVRATSDELPKGAPAGAVVPQRQNLVEGLRTIALKLE
FGVSRNQIFERTIAVHFTDPFSVSTRVTDKSTDGKLLLQVILQSQVQATLTIHDSWLDLQ
EGFAHTRNGDKKPISGFFPLVISPKSRAGILFSICLGSAPVKGEAEIPCPESILNIRFGI
LGNRAAGAHDPNAEEPSGPDGSTQSLIFKSSLLLQRPVLDPCFAVGFLPLSSTDLQVGQL
VSMRWRVERLKSSEEYSASENNDDVLYEVHANSDHWMIAGRKRGHVSLSSKQGSRITISV
LCLPLVAGYVRPPQLGLPNVDKANICCNPPSPHLVCVFPPALSSSFCIPA
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttcttagctcagttccaaagtattaaaactacttgcgatcatgtcgtcatt
gccgttgaagatgtcagtgatttatggccccttgtaaagaaggggttcgaagaccatttg
ccattcaagagagcttttctaaataacaagacccgtaatccggtgcttgtggatgaactg
ccagctgaatacatattaacaacagattcaagacttcgtagtcgatttcctcaagagcaa
tcattattttggttccgagagccatacgccactgtggttcttgtctcttgtgaggatctt
gatgagtttaagactattctcaagccacgcctaaagttaatagttcaaaatgatgaacgg
gagtggttcatcgtgttcgtgtctaaagcagcatctcacaatgatcaggccaccaagatg
gcaaaaaaagtatatgctaaacttgaagttgattttagctccaagaagagagaaagatgt
tgcaaactagacattaatggacctgatacaaatttctgggatgacttggaagccaagatc
atggaatgcatcagaaatacacttgataggcgcattcagttttatgaagaggaaatacgg
aagctcagtgaacagcgcttcatgcctgtgtggaacttctgtaacttcttcattttgaag
gaaagcctggcttttatgtttgagattgctcatctccatgaagacgcattacgtgaatat
gacgagctagaactctgctacttggaaacagtgaaacatagggactttggaggaatggac
agcggtgatgatcaggctgcattgctcaacccaggaaaaaaagcccttaaccagattgtt
caggatgattcatttagggaatttgacttcaggcagtatctatttgcatgtcaatcaaag
cttctctttaagctgacccgtccatttgaagtagcatcaagggggcattcttttattatt
agcttctcaaaggcgttggcacttcatgagagtatattgcccttctgcacgcgtgaagta
tgggttataaccgcttccttggctttaatcactgcaactgcttctcaatacaaagatgga
caagtggctcctgacattgagaaagagttttaccgtgttcagggggacctttattcttta
tgtcgtactaagttcatgcggctggcatatttaattggttatggattatatattgaaaga
agtcctgtgaacagtgccgcacttagcatgctgccttggcctaagccaggagtttggcct
tctcttcctcccgatgcttcatccgaggtgcttgtgaaagaaaagatgatgtttgaagaa
agtgtgcgggttaagcatttcggtattcagaggaagcctttacctctagaaccatctgta
cttttgcgggaagcaaatcgcagaagagcttctatttctgctgggaatgtgtttgaaatg
tttgatggacaaccaaatgcaattgatggctcaggttcaatgtcttcaccagcaaaagca
cagttgatatcaatgtcaagaactaactcttcgcctggaaactttgagagctcaatcagc
cgacctttgaggctttcagaaatttgtgttgctgctgagcatgctttgcggagtacaatt
tctgacgcagaactgtggaaatcattgtcttctgtccaggaatttgagcaaaaatacctg
gagctgtcaaaaggtgctgccaacaactatcatcgttcatggtggaagaggcatggagtt
gtacttgatggcgaaattgcagctgtcttccataagaatggaaattatgatcttgctgca
aaattgtatgaaaaggtttgtgctctttatgctggtgaaggatggcagaatcttttagct
gaggttcttcccaatttagccgagtgccaaaaggaacttggtgatcaagccggctatcta
tcttcatgtgtaagattgctctcattggataaaggattgttctccagcaaggaacgtcaa
gcatttcagtctgaagttgttcgtcttgctcatagtgagatggagcacactgtgcctcta
gatgtgtcctcactgataacattttctggcaatcctggaccaccgctgcagctttgtgat
ggtgatcctggtacactctccgttactgtatggagtggatttcctgatgacattactctt
gaatctcttagtctaactctcacagccacaactaatactgatgagggtgttaaggcaata
aaaagagctggtgcaacgatattaaagcccggaagaaatacaatcatggtcaatttacct
ccgcagagacccggttcttatgttttgggggttcttactgggaaaatcggtctactaagt
tttagatctcacagtttttcaaagggtgctcctgcagatagtgacgattttatgagttat
gagaagccaacaaggccaatcttaaaggtgttcaagccaaggtctctggttgatcttact
gctgctgtttcatctgctttattgatgaatgaacctcagtgggttggaataattgtaaag
ccaattagttactctcttaagggtgcaattctgcacatagacactggtcctgggttgact
attgaaaaatcgcataagattgaaattgagaggcacatgaatgggcacgtagatgagtca
gaccatcctgaaggttctaaagatgatgacagttctgcagctagtcccgaagtaaagcaa
ttgtctcgtcacgatggaattattgagctgcctgattgggcaagcaacataacttctgtt
ttgtggattcctgtgcgtgctaccagtgatgaacttcctaaaggagctcctgcaggtgca
gttgttccccagagacagaacttagtggagggattaagaacaatagctttgaaacttgaa
tttggggtgtcgcggaaccaaatatttgaaaggacaattgctgtgcacttcactgacccc
ttctctgtaagtacacgagttacagacaaaagcactgatggaaaattgcttttgcaggtg
atactccaatcacaagtacaagctacattgaccatccatgactcttggcttgatcttcaa
gaaggctttgctcacacaagaaatggtgataaaaagccaatctctggcttcttcccccta
gtgatctctccgaaatctagagctggaattctcttcagtatatgcctggggagtgcacca
gtaaaaggagaagctgagatcccgtgtcccgagagcattttaaatattagatttggtatt
ttgggaaatagagctgccggtgcccatgaccctaatgctgaggaacctagtggacctgat
ggatcgacccaaagtctgattttcaagagctctctgcttttacagagacctgtgcttgac
ccttgctttgcagtcggttttctgcctctttcttcaactgatcttcaagtaggacagctt
gttagcatgagatggagagttgaaaggttaaagagttcagaggaatattcagcttctgaa
aacaatgatgatgttctatacgaggtccatgcaaattcagatcactggatgattgctggg
aggaaaaggggacatgtctcactttcttcaaaacaaggatcgagaataactatttcagta
ttatgcttgccgctggttgcgggatatgttcgtcctcctcagttggggttgccaaatgtt
gacaaggccaatatttgttgcaatcctcctagtccacatttggtgtgcgtcttccctcca
gctttgagttcttctttctgtataccagcctga
DBGET
integrated database retrieval system
