Lycium barbarum (goji berry): 132619355
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Entry
132619355 CDS
T09483
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00040
Pentose and glucuronate interconversions
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132619355
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132619355
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132619355
NCBI-ProteinID:
XP_060190270
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Position
11:75852761..75855991
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AA seq
447 aa
AA seq
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MGGPKLKYSFFFLFITFCTIIPSLMAHIGDFDEVWRRRAEEAKEYARQIYEPHPENVTLA
FNQKLRDTMKELRQVKHSNSTRRGLGTKKYDGPCTVTNPIDRCWRCDPNWADNRKRLADC
AMGFGSKATGGKDGEFYVVTDNSDDYTDPKPGTLRHAVIQKEPLWIIFKKGMTIRLHQEM
IMQSDKTIDARGANVHIAKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIGIRT
KSDGDGISIFGASNIWIDHVSMKSCYDGLIDAVEGSTGITISNGHFTDHNEVMLFGASDS
SSIDQVMQITLAFNHFGKRLVQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIITQGN
RFIAPPDIFKKQVTKREYNPESVWMQWTWRSEGNLFMNGAYFTESGDPDWSQKHKDLYDG
ISAAPAEEVTWITRFAGALGCKEEQPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacctaagttaaagtattcgttcttctttctatttatcactttttgtacaata
ataccgagcctaatggctcatattggtgacttcgacgaggtatggaggaggagagccgaa
gaagcaaaagagtatgcccgtcagatttacgagccccaccctgaaaatgtcacacttgca
tttaaccaaaaacttcgcgacacaatgaaggaattaaggcaagttaaacatagcaatagc
acaaggagagggctagggaccaaaaagtacgatggaccttgcacggtcacaaatccaatt
gataggtgctggagatgtgaccctaattgggcagacaataggaaaagactagcagattgt
gcaatgggctttggatccaaggccactggtggaaaagacggtgaattctatgttgtcact
gataattctgatgattataccgatccaaaaccaggaactcttcgtcatgctgttatccag
aaggagccattgtggatcatatttaaaaagggtatgaccattaggttgcaccaggagatg
atcatgcagagtgacaagaccatcgatgctcgtggggctaatgttcacattgctaaaggt
gctggcataaccctccagtatatcaagaacgtgatcatccacggacttcacattcatgac
attgttgagggaaatggtgggatggttcgggatgcagtggaccatattggaatacgtacg
aaaagtgatggagatggcatttcaatcttcggcgcgtccaatatatggattgatcatgtc
tctatgaagagttgctacgatgggctgatcgacgctgttgaaggatccactggtatcaca
atatccaatggacatttcactgatcacaatgaggtgatgttgtttggtgcaagtgacagt
tcttccatagatcaagttatgcaaatcacattagctttcaatcattttgggaagagattg
gtacagagaatgccaaggtgtcgatggggatatatccatgttgttaacaatgactatact
cactggaatatgtatgccattggtggcagcatgcatcccactatcattacccagggtaat
cgttttattgctcctccagacatcttcaagaagcaggtaacaaagagggagtacaaccca
gaatcagtgtggatgcaatggacatggagatcagagggaaatctattcatgaatggtgca
tacttcactgaatctggagatccagattggtcacagaaacacaaagatctttatgatgga
atatcagctgccccagcagaagaagtcacttggattactaggtttgcaggtgcacttggc
tgcaaagaagaacaaccttgttag
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