Lycium barbarum (goji berry): 132620327
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Entry
132620327 CDS
T09483
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132620327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132620327
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132620327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
132620327
NCBI-ProteinID:
XP_060190975
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All DBs
Position
11:complement(23725955..23735641)
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AA seq
474 aa
AA seq
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MQSDLGKLFIGGISWDTNEERLKEYFSTYGEVLEAVIMKDRTTGRARGFGFIVFADPAVA
DRVIKEKHNIDGRMVEAKKAVPRDDQSTIGRSSPSIQGSPGPGRTRKIFVGGLASTVTEA
DFKQYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDQVLLKTFHELNGKMVEVKR
AVPKELSPGPRLTGFNHPLGRISNFLNGYNTQGGYSPNTVAGYGVRMDGRFSPIAGGRSG
FAPFGSGYGMGLNFEPGLSPGYGGSPANFNSNLSYGRGLSPYYVNSSNRFGGPIGFDGVN
GGGSSSFFSSATRNLWGNGGLGYGTNSNNSSNFAVSGSGNTGAGNFSNTGVWGSSSISSQ
GRGTVSNQSGNLGYGGDDSLYGLTGGGYGRNVTSGAPPTSSYSASNGSYDGALADLYSGG
LGYSDSTWRSERDGSGSIGYGLGTAPSDMPPKSSASYVGSYGVGKRQTNSGIGG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgatcttggaaagttattcattggtggaatttcatgggacacaaatgaagag
aggctgaaggagtattttagtacttatggggaggttttagaggctgtaattatgaaggat
aggactactggacgtgcccgtggttttggttttattgtctttgctgatcctgctgttgct
gatcgggttatcaaggagaaacacaatattgatggcaggatggttgaagcaaagaaggct
gttccaagggatgaccagagcacaataggtagaagtagtcctagcattcagggttctcct
ggtccaggacgtacaagaaaaatatttgttggaggtttagcatccacagtaactgaggct
gactttaagcagtactttgagcaatttggaacgatcacagatgtagtagttatgtacgac
cataacactcagagaccaagaggctttggtttcataacttatgattcagaggatgctgtg
gatcaagtattgcttaagaccttccatgagctgaatggtaaaatggtcgaggtcaaacgt
gctgtcccgaaagagttatcaccaggtccaagacttactgggttcaaccatccattaggt
aggatcagtaacttccttaatggatacaacacacaaggaggatactctccaaatacagtt
gcaggatatggagttaggatggatggtagatttagccccattgctggaggtaggagtggt
tttgctccgtttggttctggttatggaatgggtcttaactttgaaccagggttaagccca
ggatatgggggaagtccagcaaactttaacagcaacttgagctacggacggggactgagt
ccttattatgttaatagttcaaatagatttggtggtcctattgggtttgatggagtaaat
ggaggaggaagtagttcattcttcagctcagcaactcgcaatttgtggggaaatgggggt
ttgggttatggaacaaactccaacaactctagcaactttgcagtatctggaagtgggaac
actggggcaggaaactttagcaacactggagtttggggttcatcttcaatatcctctcaa
ggtagaggaactgtttctaaccaaagtggaaatcttggttatgggggtgatgacagttta
tatgggttgactggaggaggctatggaagaaatgtcacaagcggggctcctcctacatca
tcatattctgcatctaatggtagctatgatggggctcttgctgatttgtacagtggtggt
ttgggatatagtgattccacttggcgctctgagcgagatggatctggttcaattggatat
ggacttggaactgcaccctcagacatgccacctaaaagttctgctagttatgttggcagt
tatggtgttggtaaaagacagacaaacagcgggattggtggctag
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