Lycium barbarum (goji berry): 132621074
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Entry
132621074 CDS
T09483
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
132621074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lbb04121
]
132621074
Ubiquitin system [BR:
lbb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132621074
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_6
F-box
Motif
Other DBs
NCBI-GeneID:
132621074
NCBI-ProteinID:
XP_060191191
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Position
12:86499338..86504719
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AA seq
586 aa
AA seq
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MNPSLKKPRESMDLSNSSELTQPTAFPDEVLEKVLSLVESHKDRNSASLVCKYWYNAERW
TRTKLFIGNCYSVTPEIVARRFPKIKSVTLKGKPRFSDFNLVPENWGADVQVWLDVFARV
YPFLEELRLKRMAVTDESLEFLAKSFHGFKVLSLLSCDGFSTDGISSIATYCKNLTELDI
QENGIDDFTGSWLSCFPDDFASLEVLNFASLNSEFSFDALERLVSRCKSLRVLKLNKNVT
LGQLQRLLVRAPQLMELGTGPFVPELTGRQYAELESAFSNCKHLHTLSGLWEATRYLPVL
YAACASLTFLNLSYATIRSNEFSKLLAHCPNLRRLWVLDTVRDKGLEAVGANCPLLEELR
VFPADPFEEDIVHGVTESGFVAVSAGCPKLQYVLYFCRQMTNAAVATIVRNCPDFTHFRL
CIMNPGQPDYLTNEPMDEAFGAVVKTCKKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVA
FAGSSDRGMQCVLEGCSKLRKLEIRDCPFGNAALLSGMEKYESMRCLWMSACRVTMNGCR
MLAQGRPRLNVEVIKDENSDDLADKLYVYRSVAGPRRDAPPFVVTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctagcttgaaaaaaccaagggaatctatggatttatcgaactcgtccgagtta
actcagccgacagcatttccagatgaggtgttagagaaggtgttgtctcttgtggaatcc
cacaaagacagaaactcagcttcattggtttgcaaatattggtataatgctgagagatgg
acaaggactaagttgtttattggaaactgttattcagtcactcctgagattgtagcaagg
agatttcctaagattaagagtgttactcttaaagggaagcctagattttctgactttaat
ttggttccagagaattggggtgctgatgttcaggtttggcttgatgtttttgctagagtt
tacccctttcttgaggagttgaggttgaagagaatggctgttactgatgagagtttggag
tttttggctaaatcatttcatggatttaaggttctttctttgttgagttgtgatggtttt
agcactgatgggattagtagcattgctacttactgcaagaacttgacggagctggacatt
caggagaatgggattgatgactttactggtagttggctaagttgttttccagatgacttt
gcatcactagaggtgctaaactttgctagtctaaacagtgagttcagtttcgatgcttta
gagagacttgtcagtaggtgcaaatcactgagggttctgaagttgaacaagaacgtcacc
ttgggtcaattgcaacgcctgctcgtccgggctcctcagctgatggagctgggtacagga
cccttcgttccagagctcactggtcggcagtatgcagaacttgaaagtgcattcagcaac
tgcaaacatctccacactctttcaggtttatgggaagcgactcgatatttaccggttctt
tatgcagcctgtgctagcctgactttcctcaacttgagctatgcaaccattcggagtaat
gaattttcgaagcttcttgctcattgcccaaatttaagacgcctttgggtccttgacact
gttcgagataagggattagaggccgttggagccaactgccctttgcttgaagaactgcga
gtattccctgccgaccctttcgaggaggatatagtccatggagtgacggagtcgggcttt
gtggctgtgtctgctggttgtcctaagcttcaatatgttctctatttctgccggcaaatg
actaatgctgctgttgcaacgatagtgcgtaactgccctgatttcactcattttcgtctc
tgcataatgaatcctggccagccagattacttgacaaacgaacccatggatgaggcattt
ggtgcagtggtcaagacttgtaaaaagctccagaggctttctgtttctgggctgttaact
gacctgacctttgagtatatcgggcagtatgccaaaaaccttgagacactttcagtggct
tttgctgggagcagtgaccggggtatgcagtgcgtgcttgaagggtgttctaagctgagg
aagctggagataagggattgtccgtttggaaatgcagcacttctttctggaatggagaag
tatgaatcaatgcggtgtctttggatgtcagcttgccgtgtcaccatgaatggttgtaga
atgcttgcacaagggaggcctaggttgaatgttgaggttatcaaagatgagaatagtgat
gacctcgctgataaattatacgtctatcgttctgtagctgggccacgaagggatgctcca
ccttttgttgtaactctctag
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