KEGG   Lycium barbarum (goji berry): 132621242
Entry
132621242         CDS       T09483                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
lbb  Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lbb04812]
    132621242
Cytoskeleton proteins [BR:lbb04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     132621242
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 eIF2A Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_HPS5 WD_LRWD1
Other DBs
NCBI-GeneID: 132621242
NCBI-ProteinID: XP_060191410
LinkDB
Position
12:85808618..85820187
AA seq 1029 aa
MAKRGYKLQEFVAHSGNVNCLRFGKKTRRQFLTGGDDQNVNFWSIGKPTSTASLSGHTSP
IESVAFDSAEVLVLAGASSGVIKLWDLEETKMVRTLTGHRSYCTACEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHTRGISTIRFSPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVNFWDLETFELIGSTRREVAGVRSMTFHPDGRT
LFCGLDDSLKVYSWEPAMCHDSVEMGWSTLSDLCIHDGKLVGGAYYQNYVGVWVADISLI
EPYGAGLNPERQSNLEQKQEHVECRLERVGSNRSSNSSLRCTSPDIDSKEIKNIYVDCEN
PVTIKKVTSQSPKVVPPSDSKESKKQSSQKLNSVVGLPAKTNGLPVGKSFVVPSVVPRDI
PEEKNLDTCRRESISATSLSGGIPQKPSHIKRQSRNNFDMEKISLALESESADSLPCTVD
CKKESNVDSRLMADNNSRECSEAKDSAVKHGGEKLEKTSLQPLLKNQENRNVASEGRKES
HPVRFVNGVVVVRGRTRSLVERFEKREGLNMDDVHKLDAQSHSKTEETVVSPLPPSCCKD
EEPETFTKKTDDEPETSPFTASRFKAEEATRPLPSALSEAEEANIYALPASQCKPEELDT
SHKPASQFKSEEGRTTHLPASHFEAEKVEASRMPASQFKSDEVRESDLPASCFKAEELEA
SPKPPSQVKSEYVRKSRLPASRSKAGELEASPVPASQLRPENVRRSRLLASRSKAEELEA
SPVPVSKYKTGARTSRLSTFRSKAEEAKTSRLLASRSKAEEAQPVRLLSSGSNAERPQSA
SLPNTDQQTIAQCESAQNDDIVIEDLMQSHDVLLSAFRSRLTKLQVVRHFWERNDIRGAI
NALRKLPDHSVQADVVSALIDKMEIINLDLFSCLLPVLLALLDSKVERHANVSLELLLKL
VAVFGPVVRSAVSARPSVGVDLHAEERIQCCRQCFAHLQDIQKTLPALIRRGGLLAKGAL
QLNLLLQES
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggctaaacgtggttacaaattgcaggaatttgtggcgcattcggggaatgtaaactgt
ttaagatttgggaagaagacgcgtagacagtttctcactggtggagatgatcaaaatgtg
aatttttggtccattggtaaaccaacatccactgcgagcctgagtggtcacacaagtcca
atagaatctgtagcttttgactctgcagaggttctagtgcttgctggcgcttcatcaggt
gtaataaagctatgggatctggaagaaacaaaaatggttcgcactcttactggacacaga
tcgtattgcactgcctgtgaattccacccttttggtgaattttttgcatctggatctatg
gacactaatcttaagatatgggatataagaaagaaaggatgcatccacacatacaaaggt
catactcgaggaataagtaccataagattctctcctgatggccgctgggtggtttctggt
ggatttgacaatgttgtgaaggtatgggacctaacagctggaaagctcttgcatgacttt
aagttccatgaagggcacattcgatccatagatttccatccacttgagtttcttttggca
acaggttctgcagaccgtaccgtaaacttttgggatttggaaacatttgaattgattgga
tctaccagacgagaggttgcaggagtacgatcaatgacctttcacccggatggaaggact
ctgttttgtggactggatgatagcttgaaggtttattcatgggagcctgcgatgtgtcac
gactctgttgaaatgggatggtcgactttaagtgatctctgcatacatgatgggaagctt
gtaggtggtgcctattaccaaaactatgttggagtttgggttgcagatatttcgcttatt
gagccctatggagctggtttaaatccagagagacaaagtaacttggagcagaaacaggaa
cacgtggagtgtcgtttagaaagagtcggaagcaacagaagttctaactcaagtctgcgc
tgcacatcacctgacattgattccaaggaaataaagaatatatatgtggattgtgaaaat
cctgtaaccattaagaaagttacttctcaatcaccaaaagtggttccgccttcagattct
aaggaaagcaagaaacagtcgagtcagaagcttaattctgtcgttggtttacctgcaaaa
actaatggattgccagtaggtaaatcatttgtcgtccccagtgtggtacctcgtgatatt
ccagaggagaaaaatttggatacttgtagaagggaatctatttctgcaaccagtttaagt
ggtggtataccacaaaagccgtctcacataaagcgccaatccagaaacaacttcgatatg
gagaagatttctttggctcttgagtctgaatctgcagacagtttgccgtgtacagtagat
tgtaagaaggaatcaaatgttgatagccggcttatggcagataataattccagggaatgt
tctgaggcaaaagattcagctgtcaagcatggtggagaaaagctagagaaaacttcattg
caaccactgctgaagaatcaggagaaccgtaacgtggcttcagaaggcaggaaagagtca
catccagttcgatttgtgaatggagtggtggtagtacgaggaaggacgcgcagtttggtt
gagaggtttgagaaaagagaagggttgaacatggatgatgtccataagctggatgcacag
tctcattctaaaactgaggaaacagtagtatcccctttgccaccttcctgttgtaaagat
gaggaacccgaaacctttaccaaaaaaactgatgatgaaccagaaacatccccttttaca
gcttctcgttttaaagcagaggaggcaacccgccccttgccttcagctctttcggaagct
gaggaagcaaatatatatgctttgccagcgtctcaatgtaaacctgaggaattagacaca
tcccataagccagcttctcagtttaaatctgaagaaggaagaacaacccatttaccagct
tctcattttgaagctgagaaagttgaagcatcccgtatgccagcttctcagtttaaatct
gacgaagttagagaatccgatttaccagcttcttgttttaaagctgaggaattagaagca
tcccctaagccaccttcacaggttaaatccgagtatgtaagaaaatcccgtttgccagct
tctcgttctaaagctggggaattagaagcatcccctgtgccagcttcacagcttagaccc
gagaatgtaagaagatcccgtttactagcttctcgttctaaagctgaggaactggaagca
tcccctgtgcctgtttctaagtataaaactggagcaagaacatcccgtctgtcgactttc
cgttcaaaagctgaggaagctaaaacatcacgcttattggcttctcgttctaaagctgag
gaagcacaaccagtccgcttgttgtcttctggttctaatgctgagcgaccacaatcagct
tctttgccgaatactgatcagcagactattgcacagtgtgagtcagctcagaatgatgat
attgttattgaagatcttatgcaaagccatgatgtgctgctaagtgcgtttagatctcgt
ttgacaaagctgcaggtagttcgtcacttctgggaacggaatgacatcaggggtgctata
aatgctttgaggaagttgccagatcattctgtacaagctgatgttgtgagtgccctcata
gataaaatggagattatcaatttggatttgttttcctgcttgctgcctgtactgttagcc
ttacttgatagtaaggtagaaaggcatgcaaatgtttctctggagctgttgttgaaactt
gttgcggtctttggccccgtagttcgctcagccgtttcagcacgtccatctgtaggggtt
gatcttcatgcagaagaaagaattcagtgctgcaggcagtgctttgcccatctccaagat
atacagaaaacacttcctgcacttataaggagaggtggtctgttggcaaaaggtgcatta
caattgaatctcctacttcaagaatcatag

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