Lycium barbarum (goji berry): 132621337
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Entry
132621337 CDS
T09483
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132621337
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132621337
03041 Spliceosome [BR:
lbb03041
]
132621337
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132621337
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
132621337
Spliceosome [BR:
lbb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132621337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
132621337
NCBI-ProteinID:
XP_060191543
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All DBs
Position
12:104584003..104592307
Genome browser
AA seq
863 aa
AA seq
DB search
MELKASSAMPVFSTSDCDSNPEEKEISDDDDRNHKHRRRETSSPSAEREALEPVLSRSFR
KRNKPFENGHPYQEGDSHWGDTRFGKRRGMGSFARTPSDSYQRMRLNQSLSGHAGPGRGR
GRESGAWGPCESRFSTIDIASQLVPPLLYTGRGVQNVSSGPSSSWNAFGMVPGIPNGGFD
TLHTLGLQGTLRTALNPAMSMGIPRQMCRDFEERGFCLRGDMCPLEHGVNRIVVEDVQSL
SQFNLPVSLPNAHMLGPNTAQGSLPTVGPSSSSASGKALHRKGINPPVIESGLGMTDTFG
SDSMVGGADFYDPDQPLWSNDHPATSAALLDVNRSKIDDMGPLLNADSSDQDQVGLYDGY
KLERLDRGAGAASGSQSVWGRISSSKNKLESFSGTQSVTHHGKKTNVDTIDPQMMESSSE
PQSSPGGNMRKPSQKALRTLFVRGIPQKDNKPEALLSHFQKFGEVIDIYIPVNGERAFVQ
FSKREEAEAALKAPDAVMGNRFIKLFWANRDRIMDGVNGSSNLPHSGTPSTVPPHLSVPH
KRKDNLRTVAPKTAENAFVPLATCDLPKSVAQNGPKTTPALQKKLETLELLKEEMRKKQE
MLDQKRNEFRRKLDKLEKQAVVVKDEAVPDQAVKKPKGGTVSTTGEVESSSPVEPSNAVS
SPHAEATPFNSRSTESAEPSCSKSSSIVTEQESSNLKQSIRPLAPVGAPFILNRYKLDNR
PTAFKILPPLPSGLANVDVLKEHFSTFGDLPSVELEDVQPQDCNNGSEVQSTSARISFRS
RRSAERAYLNGKCWQGQTLQFMWLQSSNSAKDTGVGENVTPASKQPSDANGQSIANNCLA
GSQEEGSGAGNGEPENQERREDE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaagcttcatctgcaatgccggtattttcaacatctgattgcgacagtaat
cccgaggagaaagaaattagtgatgacgatgatcgtaatcacaagcatcgtagaagggaa
acaagttcaccgtctgcagagagagaagctcttgaaccagttttaagtagatcattcagg
aaaaggaacaagccgtttgaaaatgggcatccgtaccaggaaggagattctcattggggt
gatactaggtttggtaaaagacgaggaatgggttcttttgccaggacaccttcagattca
tatcagaggatgaggctaaatcagtctctttctggtcatgccggtcctggtagaggtcga
ggaagagaatctggtgcttggggtccctgtgaatctaggttcagcactattgatattgca
tctcaattggttccacctcttctttatactggaaggggggtgcaaaatgtttctagcgga
ccgagttcgtcgtggaatgcttttggaatggttccaggaatacccaatggtggttttgat
acacttcatacccttggtttacagggaacacttaggacagccttgaatcctgccatgagt
atgggcattccaaggcaaatgtgtagagacttcgaggagcgtggattttgcctaagagga
gatatgtgcccactggagcatggagtaaatcgtattgttgttgaagatgttcagagcctt
tctcagtttaatcttcctgtttcgcttcccaatgctcatatgctgggaccaaatactgca
caaggatctttacctacagtaggcccctctagctcatcagctagtggaaaagctttacat
cgaaaaggtatcaaccctcctgtgattgaaagtggattaggtatgactgatacttttggt
agtgattctatggttgggggagctgatttttatgatcctgatcagcctttatggtcaaat
gatcatcctgcaacttcagcagcactcttggatgtaaatcggtctaaaattgatgacatg
gggcctttgctgaatgcggactcctctgatcaagatcaggttgggctgtatgatggctat
aaacttgagcgtctagatagaggtgctggagcagcttcaggatctcaaagtgtgtgggga
agaatcagtagttcaaaaaataagttggaatcatttagcggcactcagagtgtaacccat
catggtaagaaaacaaatgtagataccatagacccgcaaatgatggaatcatcatcagag
ccccaaagtagtcctggaggcaatatgcgaaaaccatctcaaaaggcacttcgtacgcta
tttgtaagagggattcctcaaaaagacaacaaaccagaagcccttctttcacattttcaa
aaatttggggaggttattgacatctacatcccggtgaatggtgaacgagcttttgttcaa
ttttctaagagggaagaagctgaggctgctttaaaagcaccagatgctgtgatgggaaac
cgctttataaagcttttctgggcaaacagggataggattatggatggagtaaatggtagt
agtaatttaccccacagtgggacccccagtacagttccaccccatctatctgttcctcat
aaaagaaaagacaatttgcggacagtagccccaaaaactgctgaaaatgcttttgttcca
ttagccacctgtgatctgcccaagtctgtggctcagaatggtcccaaaaccacaccagct
ttgcaaaaaaagctggaaactctagaacttctgaaggaagaaatgcgcaagaagcaggag
atgcttgaccaaaagcggaatgagttccgacgcaagttggataaacttgagaagcaagct
gtggttgtaaaagatgaggcagtgccagatcaggctgtgaagaaaccaaagggaggaaca
gtttccaccactggtgaagtggaaagttcaagccccgtagaacctagtaatgctgtgtca
tcaccacatgctgaagcaacaccatttaatagcagatctacagagagcgccgaacccagt
tgttctaaatcatcttcgattgtcacagagcaggaatcttcaaacttgaagcagtcaatc
cgtccattggcaccagttggcgcaccttttatcttaaatagatacaaactagataacaga
cccaccgcattcaagatccttccacctctgccaagtggtctggcaaatgttgacgtcctg
aaggaacatttttctacatttggtgatcttccttctgttgagctggaagatgtgcaacct
caagattgtaataatggctcagaggtgcaaagtacatctgctaggatatctttccgatca
cgtcggtctgctgaaagagcatatctgaatggtaaatgctggcaaggccaaactctgcaa
tttatgtggttgcaatccagtaattctgcaaaggatactggtgttggagaaaatgtcacc
ccagcttcaaagcagccttcagatgctaatgggcaatccattgcaaacaattgtctggct
ggttcgcaggaggaaggaagcggggcagggaacggtgaacctgaaaatcaagaaagaaga
gaagatgaatga
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