Lycium barbarum (goji berry): 132621419
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Entry
132621419 CDS
T09483
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lbb04812
]
132621419
Cytoskeleton proteins [BR:
lbb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
132621419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_WDR19_1st
PROPPIN
VPS8_N
Motif
Other DBs
NCBI-GeneID:
132621419
NCBI-ProteinID:
XP_060191662
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Position
12:complement(14865877..14890506)
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AA seq
799 aa
AA seq
DB search
MTTTKRAYKLQEFVAHSLSVNCLKIGRKSSRVLLTGGEDHKVNLWAIGKPNAILSLSGHS
SGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISLDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHSRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
DFKSHEGQIQSIDFHPHEFLLATGSADRTVKFWDLETFELIGSSGPETSGVRCMTFNPDG
RTLLCGLHESLKVCSWEPIRCHDTVDVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDIS
RLEPYAMGNTTRLNGHSDLKSNSSGTLSNLAEDASKANLGRLSISQNSDPVKETKSFGRL
SVSQNLDLQRDSRTLTTTANAPGTPQRINLNVSVKAPPINTTAVPHTTGLKRNSAKAQSA
ANSSMVNRSEVIPVIVPRNNDRMEQASEPRKEGIATRAMQQSLQTKVSDIRKFPTLKEDL
GRPNAVSQSDIEVPKAIEFSSIAEKNNFPSVKCSNLGAAATERNVKDDNSLVSTKPEAHA
APELLSRNQNENYEARGNVVRSVNPMEGQRRARTRSIVANWEKRERIQYQECLAPSNVVG
TVPAMNMLPPNLRGLPSSAESVTVSATDEDAIADLMEQHDQFVGSMQSRLAKLQVVYQYW
QRHDIKGALNAMEKMADPSVLADVISFLTEKNDIITLEICTCLLPLLGGLLESNLDRHQD
ISLNMLLKLVRVFGSVIYSSMSAPASVGVDIEAELRMERYKLCFVELEKVKNWLSALTRR
GGSIAKSAQELSLALQEVS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgacaactactaagcgtgcttataagctacaggaattcgtagctcattctttaagcgtg
aactgcttgaagattggaaggaagtcatccagggttcttctaaccgggggagaagatcac
aaggttaacctttgggccattggaaagcccaatgccatcttgagtttatcaggtcattca
agcggaattgattcagttagttttgattcttcagaggtgttggtagctgcaggtgcagca
agtggtactatcaagctttgggatttagaggaggccaagattgttcgcacactcactggg
caccgatccaactgtatatcattggactttcatccctttggtgagttctttgcatctggg
tctctagatacaaacctaaagatttgggatatcagacgcaaagggtgtatccacacgtac
aaaggtcacagcagaggtgtcaatgccatcaggttcactccagatggccgatgggttgta
tctggtggggaagacaatactgtcaagctttgggatttaaccgcaggaaagcttttacac
gatttcaaatctcatgaagggcagattcagtccatagactttcacccccatgagtttcta
cttgcaacaggttctgctgacagaactgtaaaattctgggaccttgaaacttttgagctc
ataggttcttctggacccgagacatcaggggtgcgctgtatgaccttcaatcccgatgga
agaacccttctctgcggtttgcatgagagtttgaaggtttgctcgtgggaaccaattaga
tgtcatgatacagtagatgttggatggtctcgattgtcggatcttaatattcatgaaggg
aaactccttggatgctcttacaatcaaagctgtgttggagtgtgggttgtagatatttcg
cgtcttgaaccatatgcaatgggcaatactaccagattaaatggtcattctgatttaaaa
tcaaattcgagtgggactttatccaatctggctgaggatgctagcaaagccaatttgggt
agactctcaatttctcaaaattctgatcctgttaaagagaccaaatcttttggaagactt
tcagtatcacaaaacttggatcttcaaagggattctaggactcttactactactgcaaat
gcacctggcactcctcaaagaataaatctgaatgttagcgtgaaagcacctccaattaac
acaacagcagttcctcatacaactggtctaaagaggaattcggctaaagcccaatcagca
gctaattcttccatggtcaataggtcagaggtcatacctgttattgttcccagaaataat
gacagaatggagcaagcatctgaacccaggaaagaaggaatcgcaacaagggcaatgcag
cagtcattgcagacaaaagtctctgatatacggaagtttccaactctcaaggaagacctt
gggaggccaaatgctgtgtcacagtctgacattgaagtccctaaggctattgaattcagc
agtatagcagagaagaacaacttcccttcagttaaatgctcaaaccttggagctgcagca
actgagaggaatgtgaaggatgacaatagtctggtctcaacaaaacctgaagcgcatgca
gcacccgagttactttccagaaaccaaaacgaaaattatgaagcacgtggaaatgttgtt
aggagtgttaatcctatggaaggtcaaagaagagcaaggacacggtctattgttgcaaat
tgggagaagagagagaggattcaatatcaggagtgtcttgctcccagcaatgttgtcggg
acagtacctgctatgaatatgcttcctccaaatttgagagggctcccttcatcagctgaa
agtgtaacagtttctgctacagatgaggatgccattgctgacttgatggaacagcatgac
caatttgttggctcaatgcaatctcgtttggccaaattacaggttgtctatcaatactgg
caaagacacgacattaaaggggcacttaatgcaatggagaagatggcagatccttctgtg
cttgctgatgtaattagctttttaacagagaaaaatgacattattacattagagatttgc
acatgccttctaccactccttggggggttgcttgagagcaacttggataggcatcaagat
atttcattgaatatgctgctcaaacttgttagagtatttggttcagtgatttattcttca
atgtctgcgccagcatcagttggtgttgatattgaggcagagctaaggatggaacgctac
aagctttgctttgttgagcttgaaaaagtaaaaaattggctgtccgctcttaccagaagg
ggagggtccattgctaagtctgctcaggagctaagtctagcacttcaagaggtttcgtga
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integrated database retrieval system
