Lycium barbarum (goji berry): 132621471
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Entry
132621471 CDS
T09483
Name
(RefSeq) protein CHROMATIN REMODELING 4 isoform X1
Organism
lbb
Lycium barbarum (goji berry)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HDA2-3
PHD
ResIII
DUF1087
PHD-1st_NSD
Chromo_MIT1
zf-HC5HC2H
HTH_CHD1_Hrp3
zf-UBR_1
Arylsulfotran_N
SnAC
Motif
Other DBs
NCBI-GeneID:
132621471
NCBI-ProteinID:
XP_060191732
LinkDB
All DBs
Position
12:complement(74240946..74259356)
Genome browser
AA seq
2310 aa
AA seq
DB search
MMKENDSLSGKMLNRDWALKRKRRRLPSGPDVPNGKEKASKTLDLPSSNSHKRRVKNEST
SSGSSGKKKGNDGYYYECVVCDLGGNLLCCESCPRTYHLQCLDPPLKRIPSGKWECPSCY
QKNDTLESVNPLDTVSKRPRIKFTSGKAKDEHKSSGISKVSLIFESSIPGKKRSSGKEKT
PLSHRSQLEKLGSSSNDVSCDIKPSHHSRDGAADGNSLYGSVDKEKEVPPSDTPVEKEVP
SADTPLEKSSSSMNDTTSFLNMTDSKTNDKASEKKPDLPSSGEPVAVSEAASRKDRKRKP
NFYNIDSRNKSKSDKGKQASGNSKKSGSKSSKSQKKRKRVDHKPSVPASDRDGRDTVETQ
LKDELVSEEAGRPSDLSREAGKVAVEHLVYDNNGPDLQQVDRVLACRVQADNISRSYDIP
EINANDPALGESARLADKERVNDEKPSCDVPAVKVGIEYSGSGSEETLDIPDEGKSSKYD
VRKDKTQVYRRSGSKECKEGTGTVKEDPQGSVSEGAINKNEEDTAADDLDNTQNTSGESI
FSTEKNYIDSAKSKDNVTSGSHEVGTAKGVDEMITTDTTSFKNSEETVLAKPPTSNGVNV
AYEYLVKWVGKSNIHNSWIPESKLKVLAKRKLDNYKAKYGTATINICDEQWKLPQRIIAT
RPGAGGSDEVFVKWTGLPYDECTWEKIEEPVIAKSSHLIDQFNQFESQALARNATKDDVV
RKRRECHKNDIVTLPEQPKELQGGTLFPHQMEALNWLRKCWHKSRNVILADEMGLGKTIS
ASAFLSSLYTEFNAALPSLVLVPLSTMPNWMAEFQLWAPHLNVVEYHGSAKARAVIRQFE
WHARDRSDLSKRSTSYKFNVLLTTYEMVLADSTFLRGIPWEVLVVDEGHRLKNADSKLFS
MLNTYSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEEKFNDLTTAEKVEELK
KLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQLLRNIGKGVAQQ
SMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLHEMRIKASGKLTLLHSMLKSLHKEGHRV
LIFSQMTKLLDILEDYLAIEFGQKTYERVDGSVAVADRQAAIARFNQDKSRFVFLLSTRS
CGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLA
KRKLMLDQLFVNKSGSQKEVEDILRWGTEELFSDSSSMAEKDAVENSSDKDETVPEVEHK
RRRTGSLGDVYKDKCTKGSTKIVWDENAILKLLDRSNIQSESPDNHEAELENDMLGSVKS
LEWNEEGPEDQAGIASHMVVSEDTCVQNVEKKEDNLVSSTEENEWDKLLKVRWEKYQSEE
EAALGRGKRLRKTISYREAYASHHNETLNENGVEEEQEPVPVPEPEREYSPAGRALKAKY
SKLRARQKERLARRNAIEASGPVEGQAGQESICHLLPPQAHDVNPMNVPLQLREEKHVAM
NLDKKCCVILSSEAKKNLADLKLRTLKHKLNDNIALPSSGHPLADIPQSSNHAQDMSYTD
SMANKHLLPVLGLCAPNAHQVEAPQRNFSKLNNRQHRQGLGLEFPTIAPPPPELSTEMVA
KDQESFPRRFRLPDLPLDPSQQPPKNSLPDSYLPFNPHPRSVMHERGSAGNLKNSGATLS
DIQEKAALHKPFDEPLLPRYPFPSMNMPRPPSDLFPSLSLGSRVADVNESVREHPVLPFL
PNLKFPPHDAGRFNPQEQLGLGHMVPSSSSFPENHRKVLENIMLRTGLGSGSGSGNLLKR
KSKLDIWCEDELDCLWIGVRRHGRGNWDAMLRDPRLKFSEYKTPEDLSIRWEAEQLKILD
GPAPKPSNPTKVGKSGLFPGISDGMMARALHGCKLNEQLLPTHLTDMKLGFRDLPSRFPH
LEPPERLGLNNNHISHLPTRSADKYRVNMNAGPPDRPGASSSFLMESPFLLNSLGSSSLG
PLGRFDLQKENNDGASGFIKLPNLLDRSLNNSHDNAGGGESSNYPSLPELNKGHKVSQSK
GKEVAECSSPKNKLPHWLREAVNTAPAKPPEPDLPPTVSAIAQSVRVLYGEEKKPSIPPF
VIPSPAPSRPRDPRLSLNKKKKKHGLQVMKQFQKDFAGTSNVHGESMAGTSSLQDSAVPL
LSSVMARTSGESNLNMPPLSLNVNPSTSSVSTFPLMKTSTGLSPSPEVLQLVASCVAPGP
PIATSSSFLEDTVPRPKCVDQVAWSDTQDSHEKQETNQTSAPTTLGPFQAEKEVETDSGD
SSKTQSDSARAGQEDVQEISSEETVSDREP
NT seq
6933 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagaaaacgattcactgtctggtaaaatgcttaacagagactgggccttaaaa
cgcaaacgtcgcagacttccatccggtcctgatgtgccaaatggtaaagaaaaggcttca
aaaaccttggatttaccctcgagtaactcacacaaacgtcgagtgaaaaacgaaagcact
tcaagtggttcttctggcaagaagaaaggaaatgatgggtactattatgaatgtgttgtt
tgtgatcttggtggaaatttgctttgctgcgaaagctgtccgcgaacctaccatcttcag
tgtctggatcctcctcttaagcgtataccatctggaaagtgggaatgtcctagttgctat
cagaagaacgatacgcttgaatctgtcaatcctctagatactgtctccaaacgaccaaga
ataaaatttacaagtggaaaagcaaaagatgaacataagtcatctggaatctccaaggta
tccctgatttttgaaagctccattcctggtaagaaaagatcctcgggcaaagaaaaaact
cctttatcacatcgcagtcaattggagaagctgggttcttcctccaatgatgtttcttgt
gatattaaaccaagtcatcattcccgggatggtgctgcggatggcaattcattgtatgga
agtgttgataaagaaaaggaggtgcctccttcagatactccagttgagaaggaggtgcct
tctgcagatactccattggagaagtcaagctcttcaatgaatgatacaacatcctttttg
aatatgacggattcgaagacaaatgacaaagcctctgaaaagaagcctgatttgccttct
agtggtgaacctgtagctgtatcagaggccgcttctaggaaagacaggaaaagaaaacct
aatttttacaacattgacagtcggaacaaatctaagtctgacaagggaaagcaagcttct
ggtaattctaaaaagtctggttcaaagtcaagcaaatcgcaaaaaaagcgtaagcgtgtt
gatcataagccttcagtgcctgcgtcagatagggatgggagagatactgttgaaacccaa
cttaaagatgagttggtttccgaagaggctggtcggccatcagatctgtcacgtgaagct
ggaaaagttgccgtcgaacatttggtatatgataataatggtcctgatcttcaacaggtt
gatagggttctggcatgtcgagttcaagcggataatattagtcgttcgtatgatatcccc
gaaataaatgcaaatgacccagcattgggagaatcagcaagattagcagataaagagaga
gtaaatgatgaaaaacccagctgcgatgtgcctgcagttaaggttggtatagaatattca
ggcagtggctctgaagaaactttggacattcctgatgaaggaaaaagctcaaagtatgat
gtcagaaaggataaaactcaagtgtacagaagatcaggtagcaaagaatgcaaggaagga
actggcacagtaaaggaagaccctcaaggttcagtatctgaaggtgcaatcaacaaaaac
gaagaagacactgctgctgatgatctggataatacgcagaatacatctggagaaagcatt
ttttccactgaaaagaactatattgacagtgccaagtcgaaggataatgtcacatccggg
agtcatgaagttggaactgccaagggagtagatgaaatgattactacagataccacctct
ttcaagaacagtgaggagactgtcttggctaaaccgccaacctcgaatggtgtaaatgtc
gcctatgaatatcttgttaagtgggttgggaaatcaaatattcataactcttggatccca
gagtctaagttgaaagttctggcaaaaagaaagctggacaactacaaggcgaagtatggg
acagcaacaataaatatttgtgatgaacagtggaagctgcctcagcggattattgcaact
cggcctggtgcgggtggttcagatgaagtttttgtgaaatggacaggtcttccttatgat
gaatgtacctgggaaaaaatagaggagcctgtgattgcaaaatcatctcatttgattgat
cagtttaatcagtttgaatcccaagcattagctagaaatgctaccaaggatgatgtggtg
aggaaaaggagagaatgccataaaaatgatatagttactctgccagagcagcctaaagaa
ctgcaaggaggcacgttatttccacatcaaatggaagccttaaattggttgcgcaagtgc
tggcataaatccagaaatgttattcttgctgacgagatggggcttgggaagacaatatca
gcttctgctttcttatcatcactgtacaccgagttcaatgctgcacttccttctctggta
ttagttcctctttccacaatgccaaattggatggcagagtttcagttatgggctccacac
ctaaatgttgtagaataccatgggagtgctaaagcaagagctgtgattcgccaatttgaa
tggcatgcaagggatcgaagcgatctgagtaagaggtcgacttcatacaaatttaatgtt
cttttgactacgtatgaaatggttctcgccgattccacttttctgcgtgggatcccgtgg
gaagttcttgtggttgatgagggacaccgtctgaagaatgctgatagtaaactctttagc
atgctcaacacatattctttccagcatcgggtgctattgactggtactcctcttcagaac
aacattggcgagatgtacaacttattaaattttctgcagccatcgtcatttccttcacta
tcgtcgtttgaggagaagtttaatgatcttacaacagcggaaaaggtggaagaattgaaa
aagcttgtcgctccgcacatgcttcgcaggttgaagaaagatgccatgcaaaatattcct
cctaaaactgaacgaatggttcctgttgagttatcttctattcaggcagaatattaccgt
gcaatgcttacaaagaactatcagcttcttcgcaacattgggaaaggagttgcacagcaa
tcaatgctgaatattgtaatgcagttaagaaaagtttgcaaccatccttatctcatacca
ggaactgagcctgaatctggttcagtggaatttcttcatgaaatgagaataaaggcttct
ggaaagctgactcttctgcactctatgctcaaaagtttgcataaagaaggtcacagagtc
cttatattttcacagatgactaagcttctagatattctggaggattacttggcaattgag
tttgggcaaaaaacatatgagagagttgatggctctgttgcagtggctgatcgtcaagca
gcaatagcacggtttaatcaggacaaaagccgattcgtcttcttattatcaactcgctct
tgtggcctggggatcaatttggctactgcagatactgttattatctatgattctgatttc
aatccacatgctgatatccaggcgatgaatcgggctcatcgtatcggacagtcaaagaga
cttctagtgtaccggctagtagtccgtgccagcgttgaagaacggatacttcagcttgct
aagaggaagttgatgcttgatcagctttttgtgaacaaatcagggtcccaaaaggaggtt
gaggacatccttcgatggggaacagaagagctttttagtgattcctctagcatggcagag
aaagatgctgttgaaaactccagcgacaaagatgaaacagttcctgaagtagagcataag
cgcaggaggactggtagcctgggtgatgtgtataaagataagtgcaccaagggcagcact
aagattgtgtgggacgaaaatgctattttgaaattgcttgaccgttcaaatattcagtca
gaatcacctgataaccatgaggcagaactggagaatgatatgcttggttcagtgaagtca
ttggaatggaacgaggaaggtccagaagaccaagctggaatagcatcacatatggtggtg
agtgaagacacttgtgtacaaaatgttgagaagaaagaagataacttggttagtagcact
gaagaaaatgagtgggacaagcttctaaaagtgagatgggagaagtatcagagcgaggag
gaagcagcgcttggtcgaggcaagcgcctaaggaaaaccatttcttacagggaagcatat
gcttcacaccataatgaaacattaaatgagaatggtgtggaagaggagcaggagcctgtg
cctgtgcctgaaccagagcgagagtatagtccagctggacgagcattaaaggcaaaatat
tctaagcttcgcgctagacaaaaagaacggctagcccgtagaaatgcaattgaagcatct
ggacccgtggaaggacaggctggacaagagtctatctgtcatctgcttcctccgcaagct
catgatgtaaatccgatgaatgtaccattgcaactccgtgaagagaaacatgtggccatg
aacttggataaaaaatgctgtgtaatattatcatccgaggcaaagaaaaacctggctgac
ttaaagttgagaacgttgaaacataaattgaacgataacatagctcttccatcaagtggc
catcctcttgcagatattccccagtcaagtaatcatgcacaagatatgagctatactgac
tccatggccaataaacaccttttaccagttctgggactatgtgctcctaatgctcatcag
gtggaggcaccacagaggaacttctccaagttaaacaaccgacaacacaggcaaggatta
ggactggagttcccaactattgctcctcctcctccggagctttcaactgaaatggttgct
aaagatcaggagagcttccctcggagatttagattgccagatcttcccctggatccttca
caacaacctccaaagaatagtttacctgattcttatctcccattcaatccacatcctcga
tcagtcatgcatgaaagaggttcggctggtaatttaaagaattctggtgctactttatct
gatattcaagaaaaggcagcattgcacaaaccttttgatgagccattgttaccaagatac
ccatttccttctatgaacatgccccgtcctccctctgacttgtttcccagcttgtctttg
ggatcaagagttgcagatgtgaatgagtctgttcgtgagcaccctgtactgccgttcttg
cccaatctcaagtttccacctcatgatgcaggtaggtttaatccacaagaacaattgggg
ttagggcatatggtaccttcttcatcttcatttcctgaaaaccatcggaaggttcttgaa
aacattatgctgagaactgggttaggatcaggatctggatcaggcaacctacttaaaaga
aaaagcaaactggatatctggtgtgaagatgaactggattgtctctggattggtgtacgt
agacatggaaggggcaattgggatgccatgctgcgagatccaaggttaaaattttccgag
tataaaactcctgaagatttatcaattaggtgggaagcagagcagctcaagatcttggat
ggacctgcgccaaaaccatccaaccctaccaaagtgggaaaatcaggcttattcccagga
atttctgatggaatgatggcccgagcattgcatggttgtaaactaaatgaacagctcctt
ccaacccacctaacagacatgaaattggggtttcgtgatctgccttcaagatttccacat
ttggaacctcctgagagacttggtctgaacaacaatcatatctcacatcttccaactcgc
agtgctgataagtaccgggtgaacatgaatgcgggacccccagacagaccaggggcttcg
tcaagctttcttatggagtcgccatttctgctgaattcattgggcagcagtagcttgggt
cctcttggcaggtttgacttgcaaaaggagaataatgatggtgcaagtggatttattaaa
ttgcctaaccttcttgacaggtctttaaataactcacatgacaatgcgggaggtggtgaa
tctagcaattatccatcacttcctgaacttaataaaggtcacaaagtttctcaatcaaaa
ggcaaggaagtggctgaatgtagttcaccgaagaataagctaccacactggcttcgtgaa
gcagtgaatactgctccagcaaaaccccctgaaccggatttaccacccaccgtctctgca
attgctcagtcagttcgcgtgctatatggggaggagaagaagccctccattcctccattt
gttattccttctcctgctccatcccgacccagggacccacggttgagcttgaataagaag
aagaagaaacatggactgcaagtaatgaagcagttccagaaagattttgcaggaactagt
aatgtacatggtgagagtatggctggaacaagtagtctgcaagattcagcagtccctctg
ctttctagtgtgatggccagaacttcaggtgaatctaaccttaatatgccgcctttaagt
ctaaatgtgaatccttcaactagttcagttagtacatttcccctaatgaagacaagcact
ggattgtctccctcacccgaagtgcttcaattggttgcatcctgtgttgcaccaggtcca
cctattgctactagttcgagtttccttgaagatacggtccctcgccctaagtgtgttgat
caggttgcatggtcagacacccaagattcacatgaaaagcaggaaacaaatcagacctca
gctcctactacattaggtccatttcaggcagagaaagaagttgaaactgatagtggggat
tctagcaaaactcagtcagattctgctcgagctggacaggaagatgtacaggaaatatca
tctgaagagacagtatctgaccgtgaaccatag
DBGET
integrated database retrieval system
