Lycium barbarum (goji berry): 132621473
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Entry
132621473 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132621473
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132621473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132621473
Spliceosome [BR:
lbb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
132621473
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
132621473
NCBI-ProteinID:
XP_060191739
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Position
12:complement(73973120..73981989)
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AA seq
554 aa
AA seq
DB search
MTKKREVEAGMEDEEASVKRQKVMDHSSPSLPPVAFENPLLPLASYDDDEDDEDDGRRGH
NAEQVINNGGNKEQNGYSSEDEEDEDDEYNGRSQGKRNRAIEIRRDCPYLDAVNRQVLDF
DFEKFCSVSLTNLNVYACLVCGKYYQGRGPKSHAYTHSLEAGHHVFINLRTEKVYCLPDG
YEVIDPSLDDIIHVLNPRFTQEQVEQLDKSRQWSRALDGSDYLPGTVGLNNIRETDFVNV
TIQSLMRVTPLRNFFLIPENYQHNRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK
ASKKRFRIGAQSDPVEFMSWLLNTLHAELRTSKKGSSIIHRCFQGELEVVKEMHNRPIAE
KRESGKDGEHGSHNIGMETSRMPFLMLGLDLPPPPLFTDVMEKNIIPQVPLFNILKKFDG
ETVTEVVRPRIARMRYRVTKLPQYLILHMRRFTKNNFFMEKNPTLVNFPVKNLELKDYIP
LPAPKENEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLPQMVA
LSETYMQIYEQHLQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagcgagaagtagaagctggtatggaggatgaggaggcaagcgtaaaacgg
cagaaggtaatggatcattcatctccctctcttccaccagttgctttcgagaatccactt
cttcctcttgcatcttatgatgatgatgaagacgatgaggatgatggtaggagaggacac
aatgctgagcaagttattaataatggtggaaacaaggagcaaaatggctactcatctgag
gacgaagaagatgaggatgatgaatataatggcagaagccaagggaagcgaaatcgtgca
attgagattaggagggactgcccttatcttgatgctgtaaatagacaggtattggatttt
gacttcgagaaattttgttcggtctctctcacaaatttaaatgtgtatgcatgtttagtt
tgtgggaagtattaccaaggaagggggccgaaatcccatgcatatacacacagtcttgaa
gcaggacaccacgtgtttatcaatttacgaacagagaaagtttattgtcttcctgatgga
tatgaagtcatagatccatctcttgatgacattatacatgttctgaatccaagatttact
caggaacaggttgagcaactcgataagagccggcagtggtctagggcacttgatgggtct
gattatcttcctggaacggttgggctgaataacatcagggagactgattttgtcaatgtc
acgattcagtccttgatgcgagtaactcccttgagaaacttcttcctaatccctgaaaat
tatcaacacaatagatctcctcttgttcatagatttggagagcttacccgaaagatttgg
catgcacggaactttaagggacaggtgagcccacatgagttcttgcaagcggttatgaaa
gctagtaaaaagcgttttcggataggtgcacagtctgaccccgttgaatttatgtcatgg
ctcctgaatacccttcacgcagagcttagaacttccaaaaaaggcagtagcataatccat
cggtgctttcagggagaattggaggttgtgaaagagatgcataatagacctattgctgag
aagagggagagtgggaaagatggtgaacatggatctcacaatattggcatggaaactagc
agaatgcctttcctaatgcttggacttgatttgccaccgccacctctttttacagatgtc
atggaaaagaatattattccccaggttccattattcaacatactaaagaagtttgatggt
gagactgtgactgaagttgtaaggccccgtatagcaaggatgagataccgtgtaacaaaa
ttgccacagtatctaattctccacatgcgtaggtttacaaagaacaatttcttcatggag
aagaatcctacacttgttaacttccctgtgaagaatctagagctcaaggattatattcct
ctgccagcaccaaaggagaatgagaaacttcgctcgaagtatgatttgattgctaatatt
gttcacgatggtaagccaggcgaaggatcctacagggtgtttgtccagcgaaaatcagaa
gaactttggtatgagatgcaagacctacatgtttctgaaactcttcctcagatggttgca
ctttctgagacttatatgcagatatatgagcagcatctgcagtaa
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