Lycium barbarum (goji berry): 132621525
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Entry
132621525 CDS
T09483
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132621525
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lbb04131
]
132621525
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132621525
Membrane trafficking [BR:
lbb04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
132621525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
132621525
NCBI-ProteinID:
XP_060191814
LinkDB
All DBs
Position
12:complement(76457788..76477286)
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AA seq
978 aa
AA seq
DB search
MDSQPSRSSGRFETNTPSLTKSISDANTHNQSLASILNNPHAGKSDSFWWWSTSSSSIPT
PDFAPLSTQPKPGSETRIPDFKPYISSISDPYTRFQDIQQHTKLESLDDQNALVACLKEV
PSLYFKEDFELEDGATFKAACPFRSNVENLATQEKLSQYLDVVELHLVKEISLRSNSFFE
AQGELVDLNEKIVQGCDRIRELKESIKLLDDNLVGSARKVHELNVKRSELIGHQDKLKLI
LYVNQALSTLKLLVASADCAGALDVIDDIQHLLDGDELAGLHCFRHVRDQLAASTDSINS
ILSAEFMRISIHETGDVDASITSKFKVREMISMNGEGHEVKLDEEETSNLRDRLLPFVIG
LLRTAKLPAVLRLYRDTLTADMKTAIKMAVEELLRVLGAQPMDSDFVAGERAVEADGGSS
SLASRLRSLSPECFVHLLKAVFLVVQAHLAQASEVKRAIEWILCHLDGHYAADSVAAAIA
LGAAASETAHETNGQVNSLLQLSVQRKGNDGTMTSTLSRNFRADVLRENAEAVFAACDAA
HGRWAKILGVRSPIHPRLRLQEFLNIYNITQEFITTTEKIGGRLGYSIRGTLQSQAKAFI
DFQHESRMAKMRAILDQENWAEIDVPDEFQTIVTSLFSSESETCELADEVSADIAPSSPK
MALSSDGSAKTEARLQKISQNAEHTDSAPLLSDSTTQSKETNSRERGRSSPKLLFFRGVG
YHMVNCGLILVKMLSECIEMNNSLPGLSSEVVHRVVEILKLFNTRTCQLVLGAGAMQVSG
LKSITSKHLALASQVISFTYTIIPEIKRTLFLKVPETRKGMLILEVDRVAQDYKMHRDEI
HSKLVQIMRERLLVHLRGLPQIVESWNRPEDTDTQPSQFARSITKEVGLLQRVLCRTLHE
LDVQAIFRQVVTFFHSQISEAFSHLDISSPQAKKRMYRDVQHILGCIRSLPSDSKSNPPN
WGQLDEFVAKKIGEEVSQ
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaaccttcccgttcttcgggaaggttcgaaactaatactccatccttaacc
aaatcaatttccgatgcaaatacacataaccaaagcttagcttcaattctcaacaaccca
catgccggtaaatcagacagtttttggtggtggtccacgtcatcatcatctatacccaca
cccgatttcgccccgctatcaactcaacccaaacccggatccgaaacccgaatccccgat
tttaaaccctacatctcttccatatccgacccgtatacccgtttccaggacattcaacaa
cacacgaaattggaatccctcgacgatcaaaatgcccttgttgcttgcttaaaggaagta
ccttcgttgtattttaaagaggattttgagttggaagacggtgctacttttaaagctgcg
tgcccatttaggtccaatgtggagaatttggctactcaagagaagttatcgcagtattta
gatgttgtggaattgcatttggttaaggagatatcgttgcgatcgaattcgtttttcgag
gcacaaggggagttagttgatttaaatgagaagattgttcaagggtgtgatagaataagg
gaattgaaagagagtataaagttattggatgataatttggtagggtctgctagaaaggta
catgagttgaatgttaagaggagtgaattgattggtcatcaggataagttgaagcttata
ctatatgttaatcaagctctatcaactctcaagttgcttgttgcatctgcagattgtgcc
ggagctctagatgttatagatgatatacaacatttattggatggagatgagttagctggt
ctacattgttttcgtcatgttcgtgaccagttagccgcttcaactgattccattaacagc
attctttcagcagaatttatgcgtatatctatacacgaaactggcgatgtggatgcttca
attacatcaaaatttaaagtgcgggagatgatttctatgaatggagaaggccatgaagtt
aaattggatgaagaagaaacctctaatttgcgagaccgactgcttccttttgttattggg
ttacttagaaccgcaaagctccctgctgtgttgagattatatcgtgacactcttacggct
gatatgaaaacggccattaagatggcagttgaagaactgctacgggttcttggtgcccaa
cctatggattcagattttgttgcaggagaacgagcagttgaggctgatggtggaagctca
tcccttgccagtagattgagaagcctgtcgcctgaatgttttgttcatcttttgaaggct
gttttcctggtagtgcaggcacacttagcacaggcatccgaagttaaaagagccattgag
tggattttgtgccatcttgatggccattatgctgctgactcagttgctgctgcaattgca
cttggagcagcagcttcagaaacagctcatgaaaccaatggtcaggtaaattcgttgctg
caactttctgtgcagaggaagggaaatgatggtacaatgacgtcgactttatcacgaaat
ttcagagctgatgtattgagagagaacgcagaagccgtttttgcagcttgtgatgctgct
catggcagatgggcaaagatccttggagtgcgttcccctatccaccctagattgaggttg
caggagtttctaaatatatataacatcactcaagaatttataaccaccactgaaaagatt
ggtggaagattgggttatagtattcggggaacactgcaatcacaggccaaggcctttatt
gatttccaacacgaatccaggatggcaaagatgagggccattcttgaccaggaaaattgg
gctgagattgatgtccctgatgagtttcagacaattgtcacatcactgttctcttcagaa
tctgagacctgtgaacttgctgatgaggtttcagctgatattgcaccaagcagccccaag
atggccctgagcagtgatggctccgctaagacggaagctagacttcaaaagatatcacaa
aatgcagagcacactgattctgctccactactttcagatagcacaacacagagcaaagaa
actaactcaagagagcgtggaagatcttctcctaaactgcttttcttcagaggcgttggt
tatcacatggtgaactgcggcttgatattggtaaagatgttgtcagaatgtattgagatg
aacaatagtttgccgggcctatcttcagaagttgttcaccgtgttgtcgaaatcctgaag
ttgttcaatacgaggacttgtcagcttgtccttggtgctggagcaatgcaggtgtcaggt
ttgaagtctattacttctaaacacttggccttggcaagtcaagtcatcagtttcacatac
accataattcccgaaatcaagaggactctgttcctgaaagtgcctgagacacgtaagggg
atgctgattctggaggttgatcgtgtagcacaggactataagatgcaccgagatgaaata
cactcaaagctggtgcagataatgagggaaaggttgcttgtccacctccgtgggttgcca
cagattgttgagagttggaataggccggaagatacagacacacagccaagtcaatttgct
cgttctatcactaaggaagttggccttcttcaacgtgtcttatgtcgaaccctgcatgag
ttagatgttcaagctattttcaggcaagtggttactttcttccattctcaaatttcagaa
gctttttcgcacttggatattagcagtccacaagctaaaaaaagaatgtatcgcgatgtt
cagcatattcttggatgtatcagatcattgccttcagatagcaaatctaatcctcctaat
tgggggcaacttgatgagtttgtggcaaaaaaaattggtgaggaagttagtcaatag
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