Lycium barbarum (goji berry): 132621544
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Entry
132621544 CDS
T09483
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132621544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbb03032
]
132621544
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132621544
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
132621544
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
132621544
BRCA1-C complex
132621544
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FHA
G-patch_2
BRCT
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
132621544
NCBI-ProteinID:
XP_060191849
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Position
2:complement(115573892..115580121)
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AA seq
424 aa
AA seq
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MVWGLFPVDPLPGEDNYYFFDKGTYKVGRKGCDVIIKKDKGVSRIHAEISIDEMSSFDHS
LSNILSQVRIKDCSKNGTYLNKNVGSTEKVHDFPNKETMLKDGDLVSFGTRDATYRFSYV
SFIFFICCPKNSNTNQLVTMKVSSIGANITKKWSLDCSHVLVDDSFPLSEDLINAIVARK
PLVQYSWLELIAGKNICTAIPSYSCHTPTLMLEGVSVKTVDPPSREYCLKGYTFLLEPEN
EYKFEGRLQSLLEVGGANVSSPEMALEKSDHVICVVPAGSHIVECFPNLRSLPWVTEIDL
ASAILSGYLDPSLVASPPDHFKKMIHVGPKTFGSGFQTGLKDRLHLKDLPAVDPDDYEAM
PVEMFGMAYLRAFGHEVKLAKNTVAKPARRPARMGLGYIPPLPTVHRQDSEYGDELPSPS
DDED
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggactttttccagtcgacccactcccaggagaagataactactattttttc
gataaaggtacatataaagtgggtcgaaaaggatgtgatgtcattatcaaaaaagataaa
ggagtttcaaggatccatgcagagatttcaattgatgagatgagttctttcgatcattcg
ttgtcaaatattttatctcaagtacgcataaaagactgctcaaagaatggaacatatctg
aacaagaatgtgggctcaactgagaaagtccatgactttcccaataaagaaacaatgctt
aaggatggggatctagtttcatttggaactcgtgatgcaacttacagattctcttacgtc
tccttcatatttttcatttgctgcccgaagaattctaacacaaatcaacttgttacaatg
aaggtgtcatcaataggtgccaatataactaaaaagtggagtttggactgctcacatgtg
cttgtagatgactcctttccactgagtgaggatctgattaatgctattgtcgctagaaaa
cccttggttcaatatagttggcttgagctaatcgcaggaaaaaatatctgcaccgctatt
ccaagctacagttgtcatacaccaaccttgatgctggaaggagtgtccgtgaaaacggta
gatcctccatctcgggagtactgtttgaaaggttatacttttctgctggaaccagaaaac
gagtataaatttgagggcaggttgcagtccttactggaagttgggggtgccaacgtttct
tctcctgaaatggccttggagaaaagtgaccatgtgatatgtgtcgttccagcaggatca
cacatcgtagagtgtttcccaaaccttcgatctttgccttgggtgactgagatagatcta
gcttccgcgattctatccggatatctagatccttctttagtcgcatccccaccggatcat
tttaagaaaatgattcatgttggacccaaaacgtttgggtctggttttcagacgggtttg
aaggaccgtctacatctgaaggaccttcctgcggttgatccagatgattatgaggccatg
ccagtcgaaatgtttggcatggcctacttaagggctttcggacacgaagtgaagcttgct
aagaatactgttgcgaaacctgcccgccgtccagcacggatgggccttggatatattcca
cccctccctacggttcaccgtcaggactcggagtatggagatgagctgcccagcccttcc
gacgatgaggactag
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