Lycium barbarum (goji berry): 132621659
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Entry
132621659 CDS
T09483
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00900
Terpenoid backbone biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132621659
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lbb01006
]
132621659
Enzymes [BR:
lbb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
132621659
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
132621659
2.5.1.29 geranylgeranyl diphosphate synthase
132621659
Prenyltransferases [BR:
lbb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
132621659
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
132621659
NCBI-ProteinID:
XP_060191983
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All DBs
Position
12:93739703..93741781
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AA seq
365 aa
AA seq
DB search
MSMLIGVIHNLARGTPNRSRSAGTKLLLSSEETPKALLFLPKERTFCNSKDVSKNEAEVI
KHENTFRQAGVFDFKSYMLPKIKSVNKALDAAVPIREPIKFHEAMRYSLLSEGKRVCPVL
CIATCELVGGQESTAMPAACGMEMIHAMCMMHDDLPCMDNDDLRRGKLSHHKVYGENVTV
LAGYSLVALAFEHMAIATKGVHPKTMVRAVGELARLIGPEGATAGQVVDLLCGGKSGTRL
EELEYIHRHKTADFAEAASIVGAILGGASEDEINRLRKFSQCIGLLFQVVDDILDVTKSS
EQLGKTAGKDLLANKLTYPKMIGIDMSKKYAQKLSKEAKEQLVGFDPEKAAPLLSMADFV
LHRQK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgctaataggtgtaatccacaatcttgcaagaggtactccaaatagatccaga
tctgcaggaacaaagttgcttctttcttcagaggaaacaccaaaagctctattgttcctc
ccaaaagaaagaaccttttgtaatagcaaagatgtttccaagaatgaggctgaagttatc
aaacatgaaaacacattcagacaagctggtgtatttgatttcaaaagttacatgcttcca
aagatcaagtctgtcaataaagccttagatgctgctgtcccaatcagagaaccaatcaag
ttccatgaagcaatgagatattcgctcctttctgaaggtaagcgggtttgtcctgtactc
tgcatagccacctgtgagcttgttggtggccaagaatcaacagcaatgcctgctgcttgc
ggaatggaaatgatacatgctatgtgtatgatgcacgacgaccttccgtgcatggacaac
gatgatctccgtcgaggaaagttgtcacatcacaaggtttatggcgaaaatgtcactgtt
ctagctggttattcccttgttgccttagcatttgagcatatggcaatagccactaaaggg
gtccacccgaaaacaatggttcgtgctgttggagaactagcaagattgataggaccagag
ggggcgacagctggccaggtggttgacttgctgtgtggaggtaaatcgggtaccagatta
gaagagctcgagtatattcatcgtcacaagacagcggactttgcagaggcagcgtccatt
gtaggagcaattcttggtggtgcttccgaggatgagattaatagacttaggaaattctcc
cagtgtattgggctgctgtttcaggttgtggatgacattcttgatgtgactaaatcctct
gagcaattaggaaagacagcagggaaggatttgttggctaacaagttgacgtacccgaag
atgattggcattgacatgtctaaaaaatatgctcaaaaacttagcaaggaggctaaggag
cagcttgttggttttgatccagaaaaggcagctccactactttctatggcagatttcgtt
cttcatcggcaaaaatga
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